Gene : Cagra.2937s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31934:SF2 - RNA-DIRECTED DNA METHYLATION 4 Genomic Order:  3
Name:  ? Cagra.2937s0003 Secondary Identifier:  ? PAC:28894871
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2937s0003 0.5kb upstream 0.5kb upstream 3215 true Scaffold2937: 7782-10996 Capsella grandiflora
Cagra.2937s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2937: 10497-10996 Capsella grandiflora
Cagra.2937s0003 0.5kb downstream 0.5kb downstream 3215 true Scaffold2937: 7282-10496 Capsella grandiflora
Cagra.2937s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2937: 7282-7781 Capsella grandiflora
Cagra.2937s0003 1.0kb upstream 1.0kb upstream 3715 true Scaffold2937: 7782-11496 Capsella grandiflora
Cagra.2937s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2937: 10497-11496 Capsella grandiflora
Cagra.2937s0003 1.0kb downstream 1.0kb downstream 3715 true Scaffold2937: 6782-10496 Capsella grandiflora
Cagra.2937s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2937: 6782-7781 Capsella grandiflora
Cagra.2937s0003 2.0kb upstream 2.0kb upstream 4715 true Scaffold2937: 7782-12496 Capsella grandiflora
Cagra.2937s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2937: 10497-12496 Capsella grandiflora
Cagra.2937s0003 2.0kb downstream 2.0kb downstream 4715 true Scaffold2937: 5782-10496 Capsella grandiflora
Cagra.2937s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2937: 5782-7781 Capsella grandiflora
Cagra.2937s0003 5.0kb upstream 5.0kb upstream 7715 true Scaffold2937: 7782-15496 Capsella grandiflora
Cagra.2937s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2937: 10497-15496 Capsella grandiflora
Cagra.2937s0003 5.0kb downstream 5.0kb downstream 7715 true Scaffold2937: 2782-10496 Capsella grandiflora
Cagra.2937s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2937: 2782-7781 Capsella grandiflora
Cagra.2937s0003 10.0kb upstream 10.0kb upstream 12715 true Scaffold2937: 7782-20496 Capsella grandiflora
Cagra.2937s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2937: 10497-20496 Capsella grandiflora
Cagra.2937s0003 10.0kb downstream 10.0kb downstream 10496 true Scaffold2937: 1-10496 Capsella grandiflora
Cagra.2937s0003 10.0kb downstream 10.0kb downstream 7781 false Scaffold2937: 1-7781 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370187 5261 Brassicaceae View MSA
123831966 5264 Brassicales-Malvales View MSA
124338280 5266 SBM View MSA
124244233 5268 Malvidae View MSA
124068776 5270 Rosid View MSA
123739864 5271 Pentapetalae View MSA
122793306 5272 Eudicot View MSA
122051086 5273 Angiosperm View MSA
121346551 5274 Embryophyte View MSA
123380403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain