Gene : Cagra.2950s0001 C. grandiflora v1.1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1
Name:  ? Cagra.2950s0001 Secondary Identifier:  ? PAC:28893823
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2950s0001 0.5kb upstream 0.5kb upstream 3857 true Scaffold2950: 3929-7785 Capsella grandiflora
Cagra.2950s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2950: 7286-7785 Capsella grandiflora
Cagra.2950s0001 0.5kb downstream 0.5kb downstream 3857 true Scaffold2950: 3429-7285 Capsella grandiflora
Cagra.2950s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2950: 3429-3928 Capsella grandiflora
Cagra.2950s0001 1.0kb upstream 1.0kb upstream 4357 true Scaffold2950: 3929-8285 Capsella grandiflora
Cagra.2950s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2950: 7286-8285 Capsella grandiflora
Cagra.2950s0001 1.0kb downstream 1.0kb downstream 4357 true Scaffold2950: 2929-7285 Capsella grandiflora
Cagra.2950s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2950: 2929-3928 Capsella grandiflora
Cagra.2950s0001 2.0kb upstream 2.0kb upstream 5357 true Scaffold2950: 3929-9285 Capsella grandiflora
Cagra.2950s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2950: 7286-9285 Capsella grandiflora
Cagra.2950s0001 2.0kb downstream 2.0kb downstream 5357 true Scaffold2950: 1929-7285 Capsella grandiflora
Cagra.2950s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2950: 1929-3928 Capsella grandiflora
Cagra.2950s0001 5.0kb upstream 5.0kb upstream 8357 true Scaffold2950: 3929-12285 Capsella grandiflora
Cagra.2950s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2950: 7286-12285 Capsella grandiflora
Cagra.2950s0001 5.0kb downstream 5.0kb downstream 7285 true Scaffold2950: 1-7285 Capsella grandiflora
Cagra.2950s0001 5.0kb downstream 5.0kb downstream 3928 false Scaffold2950: 1-3928 Capsella grandiflora
Cagra.2950s0001 10.0kb upstream 10.0kb upstream 13337 true Scaffold2950: 3929-17265 Capsella grandiflora
Cagra.2950s0001 10.0kb upstream 10.0kb upstream 9980 false Scaffold2950: 7286-17265 Capsella grandiflora
Cagra.2950s0001 10.0kb downstream 10.0kb downstream 7285 true Scaffold2950: 1-7285 Capsella grandiflora
Cagra.2950s0001 10.0kb downstream 10.0kb downstream 3928 false Scaffold2950: 1-3928 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362289 5261 Brassicaceae View MSA
123836296 5264 Brassicales-Malvales View MSA
124322146 5266 SBM View MSA
124238389 5268 Malvidae View MSA
124050338 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain