Gene : Cagra.2961s0002 C. grandiflora v1.1
Defline:  (1 of 1) KOG3444 - Uncharacterized conserved protein Genomic Order:  2
Name:  ? Cagra.2961s0002 Secondary Identifier:  ? PAC:28897480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2961s0002 0.5kb upstream 0.5kb upstream 1699 true Scaffold2961: 2133-3831 Capsella grandiflora
Cagra.2961s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2961: 3332-3831 Capsella grandiflora
Cagra.2961s0002 0.5kb downstream 0.5kb downstream 1699 true Scaffold2961: 1633-3331 Capsella grandiflora
Cagra.2961s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2961: 1633-2132 Capsella grandiflora
Cagra.2961s0002 1.0kb upstream 1.0kb upstream 2199 true Scaffold2961: 2133-4331 Capsella grandiflora
Cagra.2961s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2961: 3332-4331 Capsella grandiflora
Cagra.2961s0002 1.0kb downstream 1.0kb downstream 2199 true Scaffold2961: 1133-3331 Capsella grandiflora
Cagra.2961s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2961: 1133-2132 Capsella grandiflora
Cagra.2961s0002 2.0kb upstream 2.0kb upstream 3199 true Scaffold2961: 2133-5331 Capsella grandiflora
Cagra.2961s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2961: 3332-5331 Capsella grandiflora
Cagra.2961s0002 2.0kb downstream 2.0kb downstream 3199 true Scaffold2961: 133-3331 Capsella grandiflora
Cagra.2961s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2961: 133-2132 Capsella grandiflora
Cagra.2961s0002 5.0kb upstream 5.0kb upstream 6199 true Scaffold2961: 2133-8331 Capsella grandiflora
Cagra.2961s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2961: 3332-8331 Capsella grandiflora
Cagra.2961s0002 5.0kb downstream 5.0kb downstream 3331 true Scaffold2961: 1-3331 Capsella grandiflora
Cagra.2961s0002 5.0kb downstream 5.0kb downstream 2132 false Scaffold2961: 1-2132 Capsella grandiflora
Cagra.2961s0002 10.0kb upstream 10.0kb upstream 11199 true Scaffold2961: 2133-13331 Capsella grandiflora
Cagra.2961s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold2961: 3332-13331 Capsella grandiflora
Cagra.2961s0002 10.0kb downstream 10.0kb downstream 3331 true Scaffold2961: 1-3331 Capsella grandiflora
Cagra.2961s0002 10.0kb downstream 10.0kb downstream 2132 false Scaffold2961: 1-2132 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377040 5261 Brassicaceae View MSA
123832173 5264 Brassicales-Malvales View MSA
124342770 5266 SBM View MSA
124241376 5268 Malvidae View MSA
124061127 5270 Rosid View MSA
123749455 5271 Pentapetalae View MSA
122790156 5272 Eudicot View MSA
122051418 5273 Angiosperm View MSA
121344842 5274 Embryophyte View MSA
123424203 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain