Gene : Cagra.2961s0001 C. grandiflora v1.1
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1
Name:  ? Cagra.2961s0001 Secondary Identifier:  ? PAC:28897463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2961s0001 0.5kb upstream 0.5kb upstream 1290 true Scaffold2961: 1-1290 Capsella grandiflora
Cagra.2961s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold2961: 1-2 Capsella grandiflora
Cagra.2961s0001 0.5kb downstream 0.5kb downstream 1788 true Scaffold2961: 3-1790 Capsella grandiflora
Cagra.2961s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2961: 1291-1790 Capsella grandiflora
Cagra.2961s0001 1.0kb upstream 1.0kb upstream 1290 true Scaffold2961: 1-1290 Capsella grandiflora
Cagra.2961s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold2961: 1-2 Capsella grandiflora
Cagra.2961s0001 1.0kb downstream 1.0kb downstream 2288 true Scaffold2961: 3-2290 Capsella grandiflora
Cagra.2961s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2961: 1291-2290 Capsella grandiflora
Cagra.2961s0001 2.0kb upstream 2.0kb upstream 1290 true Scaffold2961: 1-1290 Capsella grandiflora
Cagra.2961s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold2961: 1-2 Capsella grandiflora
Cagra.2961s0001 2.0kb downstream 2.0kb downstream 3288 true Scaffold2961: 3-3290 Capsella grandiflora
Cagra.2961s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2961: 1291-3290 Capsella grandiflora
Cagra.2961s0001 5.0kb upstream 5.0kb upstream 1290 true Scaffold2961: 1-1290 Capsella grandiflora
Cagra.2961s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold2961: 1-2 Capsella grandiflora
Cagra.2961s0001 5.0kb downstream 5.0kb downstream 6288 true Scaffold2961: 3-6290 Capsella grandiflora
Cagra.2961s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2961: 1291-6290 Capsella grandiflora
Cagra.2961s0001 10.0kb upstream 10.0kb upstream 1290 true Scaffold2961: 1-1290 Capsella grandiflora
Cagra.2961s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold2961: 1-2 Capsella grandiflora
Cagra.2961s0001 10.0kb downstream 10.0kb downstream 11288 true Scaffold2961: 3-11290 Capsella grandiflora
Cagra.2961s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2961: 1291-11290 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368714 5261 Brassicaceae View MSA
123828247 5264 Brassicales-Malvales View MSA
124337891 5266 SBM View MSA
124240835 5268 Malvidae View MSA
124066529 5270 Rosid View MSA
123749118 5271 Pentapetalae View MSA
122786274 5272 Eudicot View MSA
122047398 5273 Angiosperm View MSA
121344434 5274 Embryophyte View MSA
123428691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain