Gene : Cagra.2961s0047 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED Genomic Order:  47
Name:  ? Cagra.2961s0047 Secondary Identifier:  ? PAC:28897473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2961s0047 0.5kb upstream 0.5kb upstream 3887 true Scaffold2961: 152839-156725 Capsella grandiflora
Cagra.2961s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold2961: 156226-156725 Capsella grandiflora
Cagra.2961s0047 0.5kb downstream 0.5kb downstream 3887 true Scaffold2961: 152339-156225 Capsella grandiflora
Cagra.2961s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold2961: 152339-152838 Capsella grandiflora
Cagra.2961s0047 1.0kb upstream 1.0kb upstream 4387 true Scaffold2961: 152839-157225 Capsella grandiflora
Cagra.2961s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold2961: 156226-157225 Capsella grandiflora
Cagra.2961s0047 1.0kb downstream 1.0kb downstream 4387 true Scaffold2961: 151839-156225 Capsella grandiflora
Cagra.2961s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold2961: 151839-152838 Capsella grandiflora
Cagra.2961s0047 2.0kb upstream 2.0kb upstream 5387 true Scaffold2961: 152839-158225 Capsella grandiflora
Cagra.2961s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold2961: 156226-158225 Capsella grandiflora
Cagra.2961s0047 2.0kb downstream 2.0kb downstream 5387 true Scaffold2961: 150839-156225 Capsella grandiflora
Cagra.2961s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold2961: 150839-152838 Capsella grandiflora
Cagra.2961s0047 5.0kb upstream 5.0kb upstream 8387 true Scaffold2961: 152839-161225 Capsella grandiflora
Cagra.2961s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold2961: 156226-161225 Capsella grandiflora
Cagra.2961s0047 5.0kb downstream 5.0kb downstream 8387 true Scaffold2961: 147839-156225 Capsella grandiflora
Cagra.2961s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold2961: 147839-152838 Capsella grandiflora
Cagra.2961s0047 10.0kb upstream 10.0kb upstream 13387 true Scaffold2961: 152839-166225 Capsella grandiflora
Cagra.2961s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold2961: 156226-166225 Capsella grandiflora
Cagra.2961s0047 10.0kb downstream 10.0kb downstream 13387 true Scaffold2961: 142839-156225 Capsella grandiflora
Cagra.2961s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold2961: 142839-152838 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377807 5261 Brassicaceae View MSA
123836968 5264 Brassicales-Malvales View MSA
124341876 5266 SBM View MSA
124238307 5268 Malvidae View MSA
124061446 5270 Rosid View MSA
123736645 5271 Pentapetalae View MSA
122794174 5272 Eudicot View MSA
122049979 5273 Angiosperm View MSA
121351662 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain