Gene : Cagra.2968s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF4 - NTKL-BINDING PROTEIN 1 Genomic Order:  11
Name:  ? Cagra.2968s0011 Secondary Identifier:  ? PAC:28900325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2968s0011 0.5kb upstream 0.5kb upstream 1511 true Scaffold2968: 42306-43816 Capsella grandiflora
Cagra.2968s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2968: 43317-43816 Capsella grandiflora
Cagra.2968s0011 0.5kb downstream 0.5kb downstream 1511 true Scaffold2968: 41806-43316 Capsella grandiflora
Cagra.2968s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2968: 41806-42305 Capsella grandiflora
Cagra.2968s0011 1.0kb upstream 1.0kb upstream 2011 true Scaffold2968: 42306-44316 Capsella grandiflora
Cagra.2968s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2968: 43317-44316 Capsella grandiflora
Cagra.2968s0011 1.0kb downstream 1.0kb downstream 2011 true Scaffold2968: 41306-43316 Capsella grandiflora
Cagra.2968s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2968: 41306-42305 Capsella grandiflora
Cagra.2968s0011 2.0kb upstream 2.0kb upstream 3011 true Scaffold2968: 42306-45316 Capsella grandiflora
Cagra.2968s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2968: 43317-45316 Capsella grandiflora
Cagra.2968s0011 2.0kb downstream 2.0kb downstream 3011 true Scaffold2968: 40306-43316 Capsella grandiflora
Cagra.2968s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2968: 40306-42305 Capsella grandiflora
Cagra.2968s0011 5.0kb upstream 5.0kb upstream 6011 true Scaffold2968: 42306-48316 Capsella grandiflora
Cagra.2968s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2968: 43317-48316 Capsella grandiflora
Cagra.2968s0011 5.0kb downstream 5.0kb downstream 6011 true Scaffold2968: 37306-43316 Capsella grandiflora
Cagra.2968s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2968: 37306-42305 Capsella grandiflora
Cagra.2968s0011 10.0kb upstream 10.0kb upstream 11011 true Scaffold2968: 42306-53316 Capsella grandiflora
Cagra.2968s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2968: 43317-53316 Capsella grandiflora
Cagra.2968s0011 10.0kb downstream 10.0kb downstream 11011 true Scaffold2968: 32306-43316 Capsella grandiflora
Cagra.2968s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2968: 32306-42305 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376011 5261 Brassicaceae View MSA
123838329 5264 Brassicales-Malvales View MSA
124341268 5266 SBM View MSA
124237329 5268 Malvidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain