Gene : Cagra.2905s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15588:SF9 - U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM8 Genomic Order:  4
Name:  ? Cagra.2905s0004 Secondary Identifier:  ? PAC:28897838
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2905s0004 0.5kb upstream 0.5kb upstream 2870 true Scaffold2905: 11998-14867 Capsella grandiflora
Cagra.2905s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2905: 14368-14867 Capsella grandiflora
Cagra.2905s0004 0.5kb downstream 0.5kb downstream 2870 true Scaffold2905: 11498-14367 Capsella grandiflora
Cagra.2905s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2905: 11498-11997 Capsella grandiflora
Cagra.2905s0004 1.0kb upstream 1.0kb upstream 3370 true Scaffold2905: 11998-15367 Capsella grandiflora
Cagra.2905s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2905: 14368-15367 Capsella grandiflora
Cagra.2905s0004 1.0kb downstream 1.0kb downstream 3370 true Scaffold2905: 10998-14367 Capsella grandiflora
Cagra.2905s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2905: 10998-11997 Capsella grandiflora
Cagra.2905s0004 2.0kb upstream 2.0kb upstream 4370 true Scaffold2905: 11998-16367 Capsella grandiflora
Cagra.2905s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2905: 14368-16367 Capsella grandiflora
Cagra.2905s0004 2.0kb downstream 2.0kb downstream 4370 true Scaffold2905: 9998-14367 Capsella grandiflora
Cagra.2905s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2905: 9998-11997 Capsella grandiflora
Cagra.2905s0004 5.0kb upstream 5.0kb upstream 7370 true Scaffold2905: 11998-19367 Capsella grandiflora
Cagra.2905s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2905: 14368-19367 Capsella grandiflora
Cagra.2905s0004 5.0kb downstream 5.0kb downstream 7370 true Scaffold2905: 6998-14367 Capsella grandiflora
Cagra.2905s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2905: 6998-11997 Capsella grandiflora
Cagra.2905s0004 10.0kb upstream 10.0kb upstream 12370 true Scaffold2905: 11998-24367 Capsella grandiflora
Cagra.2905s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2905: 14368-24367 Capsella grandiflora
Cagra.2905s0004 10.0kb downstream 10.0kb downstream 12370 true Scaffold2905: 1998-14367 Capsella grandiflora
Cagra.2905s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2905: 1998-11997 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380629 5261 Brassicaceae View MSA
123830636 5264 Brassicales-Malvales View MSA
124338457 5266 SBM View MSA
124249658 5268 Malvidae View MSA
124065490 5270 Rosid View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain