Gene : Cagra.2905s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.2905s0003 Secondary Identifier:  ? PAC:28897843
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2905s0003 0.5kb upstream 0.5kb upstream 2212 true Scaffold2905: 7382-9593 Capsella grandiflora
Cagra.2905s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2905: 9094-9593 Capsella grandiflora
Cagra.2905s0003 0.5kb downstream 0.5kb downstream 2212 true Scaffold2905: 6882-9093 Capsella grandiflora
Cagra.2905s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2905: 6882-7381 Capsella grandiflora
Cagra.2905s0003 1.0kb upstream 1.0kb upstream 2712 true Scaffold2905: 7382-10093 Capsella grandiflora
Cagra.2905s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2905: 9094-10093 Capsella grandiflora
Cagra.2905s0003 1.0kb downstream 1.0kb downstream 2712 true Scaffold2905: 6382-9093 Capsella grandiflora
Cagra.2905s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2905: 6382-7381 Capsella grandiflora
Cagra.2905s0003 2.0kb upstream 2.0kb upstream 3712 true Scaffold2905: 7382-11093 Capsella grandiflora
Cagra.2905s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2905: 9094-11093 Capsella grandiflora
Cagra.2905s0003 2.0kb downstream 2.0kb downstream 3712 true Scaffold2905: 5382-9093 Capsella grandiflora
Cagra.2905s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2905: 5382-7381 Capsella grandiflora
Cagra.2905s0003 5.0kb upstream 5.0kb upstream 6712 true Scaffold2905: 7382-14093 Capsella grandiflora
Cagra.2905s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2905: 9094-14093 Capsella grandiflora
Cagra.2905s0003 5.0kb downstream 5.0kb downstream 6712 true Scaffold2905: 2382-9093 Capsella grandiflora
Cagra.2905s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2905: 2382-7381 Capsella grandiflora
Cagra.2905s0003 10.0kb upstream 10.0kb upstream 11712 true Scaffold2905: 7382-19093 Capsella grandiflora
Cagra.2905s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold2905: 9094-19093 Capsella grandiflora
Cagra.2905s0003 10.0kb downstream 10.0kb downstream 9093 true Scaffold2905: 1-9093 Capsella grandiflora
Cagra.2905s0003 10.0kb downstream 10.0kb downstream 7381 false Scaffold2905: 1-7381 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368410 5261 Brassicaceae View MSA
123839937 5264 Brassicales-Malvales View MSA
124343640 5266 SBM View MSA
124243189 5268 Malvidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain