Gene : Cagra.2920s0006 C. grandiflora v1.1
Defline:  (1 of 4) PTHR32295:SF14 - PROTEIN IQ-DOMAIN 31-RELATED Genomic Order:  6
Name:  ? Cagra.2920s0006 Secondary Identifier:  ? PAC:28913529
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2920s0006 0.5kb upstream 0.5kb upstream 3924 true Scaffold2920: 20020-23943 Capsella grandiflora
Cagra.2920s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2920: 23444-23943 Capsella grandiflora
Cagra.2920s0006 0.5kb downstream 0.5kb downstream 3924 true Scaffold2920: 19520-23443 Capsella grandiflora
Cagra.2920s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2920: 19520-20019 Capsella grandiflora
Cagra.2920s0006 1.0kb upstream 1.0kb upstream 4424 true Scaffold2920: 20020-24443 Capsella grandiflora
Cagra.2920s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2920: 23444-24443 Capsella grandiflora
Cagra.2920s0006 1.0kb downstream 1.0kb downstream 4424 true Scaffold2920: 19020-23443 Capsella grandiflora
Cagra.2920s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2920: 19020-20019 Capsella grandiflora
Cagra.2920s0006 2.0kb upstream 2.0kb upstream 5424 true Scaffold2920: 20020-25443 Capsella grandiflora
Cagra.2920s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2920: 23444-25443 Capsella grandiflora
Cagra.2920s0006 2.0kb downstream 2.0kb downstream 5424 true Scaffold2920: 18020-23443 Capsella grandiflora
Cagra.2920s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2920: 18020-20019 Capsella grandiflora
Cagra.2920s0006 5.0kb upstream 5.0kb upstream 8424 true Scaffold2920: 20020-28443 Capsella grandiflora
Cagra.2920s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2920: 23444-28443 Capsella grandiflora
Cagra.2920s0006 5.0kb downstream 5.0kb downstream 8424 true Scaffold2920: 15020-23443 Capsella grandiflora
Cagra.2920s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2920: 15020-20019 Capsella grandiflora
Cagra.2920s0006 10.0kb upstream 10.0kb upstream 13424 true Scaffold2920: 20020-33443 Capsella grandiflora
Cagra.2920s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2920: 23444-33443 Capsella grandiflora
Cagra.2920s0006 10.0kb downstream 10.0kb downstream 13424 true Scaffold2920: 10020-23443 Capsella grandiflora
Cagra.2920s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2920: 10020-20019 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041093 5273 Angiosperm View MSA
122361021 5261 Brassicaceae View MSA
123798085 5264 Brassicales-Malvales View MSA
124295763 5266 SBM View MSA
124245105 5268 Malvidae View MSA
124071247 5270 Rosid View MSA
123750451 5271 Pentapetalae View MSA
122791855 5272 Eudicot View MSA
121309793 5274 Embryophyte View MSA
123347451 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain