Gene : Cagra.2925s0021 C. grandiflora v1.1
Defline:  (1 of 3) PTHR13117 - ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED Genomic Order:  21
Name:  ? Cagra.2925s0021 Secondary Identifier:  ? PAC:28896676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2925s0021 0.5kb upstream 0.5kb upstream 2227 true Scaffold2925: 94149-96375 Capsella grandiflora
Cagra.2925s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold2925: 95876-96375 Capsella grandiflora
Cagra.2925s0021 0.5kb downstream 0.5kb downstream 2227 true Scaffold2925: 93649-95875 Capsella grandiflora
Cagra.2925s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold2925: 93649-94148 Capsella grandiflora
Cagra.2925s0021 1.0kb upstream 1.0kb upstream 2727 true Scaffold2925: 94149-96875 Capsella grandiflora
Cagra.2925s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold2925: 95876-96875 Capsella grandiflora
Cagra.2925s0021 1.0kb downstream 1.0kb downstream 2727 true Scaffold2925: 93149-95875 Capsella grandiflora
Cagra.2925s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold2925: 93149-94148 Capsella grandiflora
Cagra.2925s0021 2.0kb upstream 2.0kb upstream 3727 true Scaffold2925: 94149-97875 Capsella grandiflora
Cagra.2925s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold2925: 95876-97875 Capsella grandiflora
Cagra.2925s0021 2.0kb downstream 2.0kb downstream 3727 true Scaffold2925: 92149-95875 Capsella grandiflora
Cagra.2925s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold2925: 92149-94148 Capsella grandiflora
Cagra.2925s0021 5.0kb upstream 5.0kb upstream 6727 true Scaffold2925: 94149-100875 Capsella grandiflora
Cagra.2925s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold2925: 95876-100875 Capsella grandiflora
Cagra.2925s0021 5.0kb downstream 5.0kb downstream 6727 true Scaffold2925: 89149-95875 Capsella grandiflora
Cagra.2925s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold2925: 89149-94148 Capsella grandiflora
Cagra.2925s0021 10.0kb upstream 10.0kb upstream 11727 true Scaffold2925: 94149-105875 Capsella grandiflora
Cagra.2925s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold2925: 95876-105875 Capsella grandiflora
Cagra.2925s0021 10.0kb downstream 10.0kb downstream 11727 true Scaffold2925: 84149-95875 Capsella grandiflora
Cagra.2925s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold2925: 84149-94148 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027640 5273 Angiosperm View MSA
122343755 5261 Brassicaceae View MSA
123783860 5264 Brassicales-Malvales View MSA
124282071 5266 SBM View MSA
124136726 5268 Malvidae View MSA
124069265 5270 Rosid View MSA
123741934 5271 Pentapetalae View MSA
122770164 5272 Eudicot View MSA
121297268 5274 Embryophyte View MSA
123335341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain