Gene : Cagra.2925s0044 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12415//PTHR12415:SF2 - TYROSYL-DNA PHOSPHODIESTERASE 1 Genomic Order:  44
Name:  ? Cagra.2925s0044 Secondary Identifier:  ? PAC:28896662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2925s0044 0.5kb upstream 0.5kb upstream 5280 true Scaffold2925: 159748-165027 Capsella grandiflora
Cagra.2925s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold2925: 164528-165027 Capsella grandiflora
Cagra.2925s0044 0.5kb downstream 0.5kb downstream 5280 true Scaffold2925: 159248-164527 Capsella grandiflora
Cagra.2925s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold2925: 159248-159747 Capsella grandiflora
Cagra.2925s0044 1.0kb upstream 1.0kb upstream 5780 true Scaffold2925: 159748-165527 Capsella grandiflora
Cagra.2925s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold2925: 164528-165527 Capsella grandiflora
Cagra.2925s0044 1.0kb downstream 1.0kb downstream 5780 true Scaffold2925: 158748-164527 Capsella grandiflora
Cagra.2925s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold2925: 158748-159747 Capsella grandiflora
Cagra.2925s0044 2.0kb upstream 2.0kb upstream 6780 true Scaffold2925: 159748-166527 Capsella grandiflora
Cagra.2925s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold2925: 164528-166527 Capsella grandiflora
Cagra.2925s0044 2.0kb downstream 2.0kb downstream 6780 true Scaffold2925: 157748-164527 Capsella grandiflora
Cagra.2925s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold2925: 157748-159747 Capsella grandiflora
Cagra.2925s0044 5.0kb upstream 5.0kb upstream 9780 true Scaffold2925: 159748-169527 Capsella grandiflora
Cagra.2925s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold2925: 164528-169527 Capsella grandiflora
Cagra.2925s0044 5.0kb downstream 5.0kb downstream 9780 true Scaffold2925: 154748-164527 Capsella grandiflora
Cagra.2925s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold2925: 154748-159747 Capsella grandiflora
Cagra.2925s0044 10.0kb upstream 10.0kb upstream 14780 true Scaffold2925: 159748-174527 Capsella grandiflora
Cagra.2925s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold2925: 164528-174527 Capsella grandiflora
Cagra.2925s0044 10.0kb downstream 10.0kb downstream 14780 true Scaffold2925: 149748-164527 Capsella grandiflora
Cagra.2925s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold2925: 149748-159747 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365267 5261 Brassicaceae View MSA
123833005 5264 Brassicales-Malvales View MSA
124336852 5266 SBM View MSA
124238479 5268 Malvidae View MSA
124063515 5270 Rosid View MSA
123749265 5271 Pentapetalae View MSA
122786088 5272 Eudicot View MSA
122047729 5273 Angiosperm View MSA
121349694 5274 Embryophyte View MSA
123381403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain