Gene : Cagra.2848s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23257:SF331 - OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN KINASE Genomic Order:  42
Name:  ? Cagra.2848s0042 Secondary Identifier:  ? PAC:28919688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0042 0.5kb upstream 0.5kb upstream 5348 true Scaffold2848: 161816-167163 Capsella grandiflora
Cagra.2848s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 161816-162315 Capsella grandiflora
Cagra.2848s0042 0.5kb downstream 0.5kb downstream 5348 true Scaffold2848: 162316-167663 Capsella grandiflora
Cagra.2848s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 167164-167663 Capsella grandiflora
Cagra.2848s0042 1.0kb upstream 1.0kb upstream 5848 true Scaffold2848: 161316-167163 Capsella grandiflora
Cagra.2848s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 161316-162315 Capsella grandiflora
Cagra.2848s0042 1.0kb downstream 1.0kb downstream 5848 true Scaffold2848: 162316-168163 Capsella grandiflora
Cagra.2848s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 167164-168163 Capsella grandiflora
Cagra.2848s0042 2.0kb upstream 2.0kb upstream 6848 true Scaffold2848: 160316-167163 Capsella grandiflora
Cagra.2848s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 160316-162315 Capsella grandiflora
Cagra.2848s0042 2.0kb downstream 2.0kb downstream 6848 true Scaffold2848: 162316-169163 Capsella grandiflora
Cagra.2848s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 167164-169163 Capsella grandiflora
Cagra.2848s0042 5.0kb upstream 5.0kb upstream 9848 true Scaffold2848: 157316-167163 Capsella grandiflora
Cagra.2848s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 157316-162315 Capsella grandiflora
Cagra.2848s0042 5.0kb downstream 5.0kb downstream 9848 true Scaffold2848: 162316-172163 Capsella grandiflora
Cagra.2848s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 167164-172163 Capsella grandiflora
Cagra.2848s0042 10.0kb upstream 10.0kb upstream 14848 true Scaffold2848: 152316-167163 Capsella grandiflora
Cagra.2848s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 152316-162315 Capsella grandiflora
Cagra.2848s0042 10.0kb downstream 10.0kb downstream 14848 true Scaffold2848: 162316-177163 Capsella grandiflora
Cagra.2848s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 167164-177163 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370001 5261 Brassicaceae View MSA
123841088 5264 Brassicales-Malvales View MSA
124340935 5266 SBM View MSA
124240395 5268 Malvidae View MSA
124068889 5270 Rosid View MSA
123748466 5271 Pentapetalae View MSA
122785809 5272 Eudicot View MSA
122048120 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain