Gene : Cagra.2848s0069 C. grandiflora v1.1
Defline:  (1 of 1) KOG4495 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B Genomic Order:  69
Name:  ? Cagra.2848s0069 Secondary Identifier:  ? PAC:28919614
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0069 0.5kb upstream 0.5kb upstream 2078 true Scaffold2848: 273260-275337 Capsella grandiflora
Cagra.2848s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 273260-273759 Capsella grandiflora
Cagra.2848s0069 0.5kb downstream 0.5kb downstream 2078 true Scaffold2848: 273760-275837 Capsella grandiflora
Cagra.2848s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 275338-275837 Capsella grandiflora
Cagra.2848s0069 1.0kb upstream 1.0kb upstream 2578 true Scaffold2848: 272760-275337 Capsella grandiflora
Cagra.2848s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 272760-273759 Capsella grandiflora
Cagra.2848s0069 1.0kb downstream 1.0kb downstream 2578 true Scaffold2848: 273760-276337 Capsella grandiflora
Cagra.2848s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 275338-276337 Capsella grandiflora
Cagra.2848s0069 2.0kb upstream 2.0kb upstream 3578 true Scaffold2848: 271760-275337 Capsella grandiflora
Cagra.2848s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 271760-273759 Capsella grandiflora
Cagra.2848s0069 2.0kb downstream 2.0kb downstream 3578 true Scaffold2848: 273760-277337 Capsella grandiflora
Cagra.2848s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 275338-277337 Capsella grandiflora
Cagra.2848s0069 5.0kb upstream 5.0kb upstream 6578 true Scaffold2848: 268760-275337 Capsella grandiflora
Cagra.2848s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 268760-273759 Capsella grandiflora
Cagra.2848s0069 5.0kb downstream 5.0kb downstream 6578 true Scaffold2848: 273760-280337 Capsella grandiflora
Cagra.2848s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 275338-280337 Capsella grandiflora
Cagra.2848s0069 10.0kb upstream 10.0kb upstream 11578 true Scaffold2848: 263760-275337 Capsella grandiflora
Cagra.2848s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 263760-273759 Capsella grandiflora
Cagra.2848s0069 10.0kb downstream 10.0kb downstream 11578 true Scaffold2848: 273760-285337 Capsella grandiflora
Cagra.2848s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 275338-285337 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041259 5273 Angiosperm View MSA
122373924 5261 Brassicaceae View MSA
123830058 5264 Brassicales-Malvales View MSA
124337659 5266 SBM View MSA
124238528 5268 Malvidae View MSA
124069900 5270 Rosid View MSA
123745453 5271 Pentapetalae View MSA
122793861 5272 Eudicot View MSA
121350685 5274 Embryophyte View MSA
123425021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain