Gene : Cagra.2848s0088 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20902 - 41-2 PROTEIN ANTIGEN-RELATED Genomic Order:  88
Name:  ? Cagra.2848s0088 Secondary Identifier:  ? PAC:28919690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0088 0.5kb upstream 0.5kb upstream 2301 true Scaffold2848: 321010-323310 Capsella grandiflora
Cagra.2848s0088 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 322811-323310 Capsella grandiflora
Cagra.2848s0088 0.5kb downstream 0.5kb downstream 2301 true Scaffold2848: 320510-322810 Capsella grandiflora
Cagra.2848s0088 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 320510-321009 Capsella grandiflora
Cagra.2848s0088 1.0kb upstream 1.0kb upstream 2801 true Scaffold2848: 321010-323810 Capsella grandiflora
Cagra.2848s0088 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 322811-323810 Capsella grandiflora
Cagra.2848s0088 1.0kb downstream 1.0kb downstream 2801 true Scaffold2848: 320010-322810 Capsella grandiflora
Cagra.2848s0088 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 320010-321009 Capsella grandiflora
Cagra.2848s0088 2.0kb upstream 2.0kb upstream 3801 true Scaffold2848: 321010-324810 Capsella grandiflora
Cagra.2848s0088 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 322811-324810 Capsella grandiflora
Cagra.2848s0088 2.0kb downstream 2.0kb downstream 3801 true Scaffold2848: 319010-322810 Capsella grandiflora
Cagra.2848s0088 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 319010-321009 Capsella grandiflora
Cagra.2848s0088 5.0kb upstream 5.0kb upstream 6801 true Scaffold2848: 321010-327810 Capsella grandiflora
Cagra.2848s0088 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 322811-327810 Capsella grandiflora
Cagra.2848s0088 5.0kb downstream 5.0kb downstream 6801 true Scaffold2848: 316010-322810 Capsella grandiflora
Cagra.2848s0088 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 316010-321009 Capsella grandiflora
Cagra.2848s0088 10.0kb upstream 10.0kb upstream 11493 true Scaffold2848: 321010-332502 Capsella grandiflora
Cagra.2848s0088 10.0kb upstream 10.0kb upstream 9692 false Scaffold2848: 322811-332502 Capsella grandiflora
Cagra.2848s0088 10.0kb downstream 10.0kb downstream 11801 true Scaffold2848: 311010-322810 Capsella grandiflora
Cagra.2848s0088 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 311010-321009 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367949 5261 Brassicaceae View MSA
123835113 5264 Brassicales-Malvales View MSA
124338888 5266 SBM View MSA
124241541 5268 Malvidae View MSA
124065767 5270 Rosid View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain