Gene : Cagra.2848s0089 C. grandiflora v1.1
Defline:  (1 of 2) KOG1049 - Polyadenylation factor I complex, subunit FIP1 Genomic Order:  89
Name:  ? Cagra.2848s0089 Secondary Identifier:  ? PAC:28919632
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0089 0.5kb upstream 0.5kb upstream 5908 true Scaffold2848: 322455-328362 Capsella grandiflora
Cagra.2848s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 322455-322954 Capsella grandiflora
Cagra.2848s0089 0.5kb downstream 0.5kb downstream 5908 true Scaffold2848: 322955-328862 Capsella grandiflora
Cagra.2848s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 328363-328862 Capsella grandiflora
Cagra.2848s0089 1.0kb upstream 1.0kb upstream 6408 true Scaffold2848: 321955-328362 Capsella grandiflora
Cagra.2848s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 321955-322954 Capsella grandiflora
Cagra.2848s0089 1.0kb downstream 1.0kb downstream 6408 true Scaffold2848: 322955-329362 Capsella grandiflora
Cagra.2848s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 328363-329362 Capsella grandiflora
Cagra.2848s0089 2.0kb upstream 2.0kb upstream 7408 true Scaffold2848: 320955-328362 Capsella grandiflora
Cagra.2848s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 320955-322954 Capsella grandiflora
Cagra.2848s0089 2.0kb downstream 2.0kb downstream 7408 true Scaffold2848: 322955-330362 Capsella grandiflora
Cagra.2848s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 328363-330362 Capsella grandiflora
Cagra.2848s0089 5.0kb upstream 5.0kb upstream 10408 true Scaffold2848: 317955-328362 Capsella grandiflora
Cagra.2848s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 317955-322954 Capsella grandiflora
Cagra.2848s0089 5.0kb downstream 5.0kb downstream 9548 true Scaffold2848: 322955-332502 Capsella grandiflora
Cagra.2848s0089 5.0kb downstream 5.0kb downstream 4140 false Scaffold2848: 328363-332502 Capsella grandiflora
Cagra.2848s0089 10.0kb upstream 10.0kb upstream 15408 true Scaffold2848: 312955-328362 Capsella grandiflora
Cagra.2848s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 312955-322954 Capsella grandiflora
Cagra.2848s0089 10.0kb downstream 10.0kb downstream 9548 true Scaffold2848: 322955-332502 Capsella grandiflora
Cagra.2848s0089 10.0kb downstream 10.0kb downstream 4140 false Scaffold2848: 328363-332502 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368273 5261 Brassicaceae View MSA
123839134 5264 Brassicales-Malvales View MSA
124340704 5266 SBM View MSA
124243475 5268 Malvidae View MSA
124060517 5270 Rosid View MSA
123741649 5271 Pentapetalae View MSA
122790791 5272 Eudicot View MSA
122050325 5273 Angiosperm View MSA
121345578 5274 Embryophyte View MSA
123425422 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain