Gene : Cagra.2774s0012 C. grandiflora v1.1
Defline:  (1 of 3) PTHR27001:SF89 - PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK1-RELATED Genomic Order:  12
Name:  ? Cagra.2774s0012 Secondary Identifier:  ? PAC:28894138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2774s0012 0.5kb upstream 0.5kb upstream 3682 true Scaffold2774: 43850-47531 Capsella grandiflora
Cagra.2774s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2774: 47032-47531 Capsella grandiflora
Cagra.2774s0012 0.5kb downstream 0.5kb downstream 3682 true Scaffold2774: 43350-47031 Capsella grandiflora
Cagra.2774s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2774: 43350-43849 Capsella grandiflora
Cagra.2774s0012 1.0kb upstream 1.0kb upstream 4182 true Scaffold2774: 43850-48031 Capsella grandiflora
Cagra.2774s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2774: 47032-48031 Capsella grandiflora
Cagra.2774s0012 1.0kb downstream 1.0kb downstream 4182 true Scaffold2774: 42850-47031 Capsella grandiflora
Cagra.2774s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2774: 42850-43849 Capsella grandiflora
Cagra.2774s0012 2.0kb upstream 2.0kb upstream 5182 true Scaffold2774: 43850-49031 Capsella grandiflora
Cagra.2774s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2774: 47032-49031 Capsella grandiflora
Cagra.2774s0012 2.0kb downstream 2.0kb downstream 5182 true Scaffold2774: 41850-47031 Capsella grandiflora
Cagra.2774s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2774: 41850-43849 Capsella grandiflora
Cagra.2774s0012 5.0kb upstream 5.0kb upstream 8182 true Scaffold2774: 43850-52031 Capsella grandiflora
Cagra.2774s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2774: 47032-52031 Capsella grandiflora
Cagra.2774s0012 5.0kb downstream 5.0kb downstream 8182 true Scaffold2774: 38850-47031 Capsella grandiflora
Cagra.2774s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2774: 38850-43849 Capsella grandiflora
Cagra.2774s0012 10.0kb upstream 10.0kb upstream 13182 true Scaffold2774: 43850-57031 Capsella grandiflora
Cagra.2774s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2774: 47032-57031 Capsella grandiflora
Cagra.2774s0012 10.0kb downstream 10.0kb downstream 13182 true Scaffold2774: 33850-47031 Capsella grandiflora
Cagra.2774s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2774: 33850-43849 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381545 5261 Brassicaceae View MSA
123836108 5264 Brassicales-Malvales View MSA
124342587 5266 SBM View MSA
124253534 5268 Malvidae View MSA
124074896 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain