Gene : Cagra.2776s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11262:SF9 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  6
Name:  ? Cagra.2776s0006 Secondary Identifier:  ? PAC:28909977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2776s0006 0.5kb upstream 0.5kb upstream 4722 true Scaffold2776: 28412-33133 Capsella grandiflora
Cagra.2776s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold2776: 28412-28911 Capsella grandiflora
Cagra.2776s0006 0.5kb downstream 0.5kb downstream 4722 true Scaffold2776: 28912-33633 Capsella grandiflora
Cagra.2776s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold2776: 33134-33633 Capsella grandiflora
Cagra.2776s0006 1.0kb upstream 1.0kb upstream 5222 true Scaffold2776: 27912-33133 Capsella grandiflora
Cagra.2776s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold2776: 27912-28911 Capsella grandiflora
Cagra.2776s0006 1.0kb downstream 1.0kb downstream 5222 true Scaffold2776: 28912-34133 Capsella grandiflora
Cagra.2776s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold2776: 33134-34133 Capsella grandiflora
Cagra.2776s0006 2.0kb upstream 2.0kb upstream 6222 true Scaffold2776: 26912-33133 Capsella grandiflora
Cagra.2776s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold2776: 26912-28911 Capsella grandiflora
Cagra.2776s0006 2.0kb downstream 2.0kb downstream 6222 true Scaffold2776: 28912-35133 Capsella grandiflora
Cagra.2776s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold2776: 33134-35133 Capsella grandiflora
Cagra.2776s0006 5.0kb upstream 5.0kb upstream 9222 true Scaffold2776: 23912-33133 Capsella grandiflora
Cagra.2776s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold2776: 23912-28911 Capsella grandiflora
Cagra.2776s0006 5.0kb downstream 5.0kb downstream 9222 true Scaffold2776: 28912-38133 Capsella grandiflora
Cagra.2776s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold2776: 33134-38133 Capsella grandiflora
Cagra.2776s0006 10.0kb upstream 10.0kb upstream 14222 true Scaffold2776: 18912-33133 Capsella grandiflora
Cagra.2776s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold2776: 18912-28911 Capsella grandiflora
Cagra.2776s0006 10.0kb downstream 10.0kb downstream 14222 true Scaffold2776: 28912-43133 Capsella grandiflora
Cagra.2776s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold2776: 33134-43133 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366419 5261 Brassicaceae View MSA
123831004 5264 Brassicales-Malvales View MSA
124339893 5266 SBM View MSA
124241406 5268 Malvidae View MSA
124069247 5270 Rosid View MSA
123739366 5271 Pentapetalae View MSA
122793797 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain