Gene : Cagra.2783s0002 C. grandiflora v1.1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  2
Name:  ? Cagra.2783s0002 Secondary Identifier:  ? PAC:28894799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2783s0002 0.5kb upstream 0.5kb upstream 4395 true Scaffold2783: 1343-5737 Capsella grandiflora
Cagra.2783s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2783: 5238-5737 Capsella grandiflora
Cagra.2783s0002 0.5kb downstream 0.5kb downstream 4395 true Scaffold2783: 843-5237 Capsella grandiflora
Cagra.2783s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2783: 843-1342 Capsella grandiflora
Cagra.2783s0002 1.0kb upstream 1.0kb upstream 4895 true Scaffold2783: 1343-6237 Capsella grandiflora
Cagra.2783s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2783: 5238-6237 Capsella grandiflora
Cagra.2783s0002 1.0kb downstream 1.0kb downstream 4895 true Scaffold2783: 343-5237 Capsella grandiflora
Cagra.2783s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2783: 343-1342 Capsella grandiflora
Cagra.2783s0002 2.0kb upstream 2.0kb upstream 5895 true Scaffold2783: 1343-7237 Capsella grandiflora
Cagra.2783s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2783: 5238-7237 Capsella grandiflora
Cagra.2783s0002 2.0kb downstream 2.0kb downstream 5237 true Scaffold2783: 1-5237 Capsella grandiflora
Cagra.2783s0002 2.0kb downstream 2.0kb downstream 1342 false Scaffold2783: 1-1342 Capsella grandiflora
Cagra.2783s0002 5.0kb upstream 5.0kb upstream 8895 true Scaffold2783: 1343-10237 Capsella grandiflora
Cagra.2783s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2783: 5238-10237 Capsella grandiflora
Cagra.2783s0002 5.0kb downstream 5.0kb downstream 5237 true Scaffold2783: 1-5237 Capsella grandiflora
Cagra.2783s0002 5.0kb downstream 5.0kb downstream 1342 false Scaffold2783: 1-1342 Capsella grandiflora
Cagra.2783s0002 10.0kb upstream 10.0kb upstream 13895 true Scaffold2783: 1343-15237 Capsella grandiflora
Cagra.2783s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold2783: 5238-15237 Capsella grandiflora
Cagra.2783s0002 10.0kb downstream 10.0kb downstream 5237 true Scaffold2783: 1-5237 Capsella grandiflora
Cagra.2783s0002 10.0kb downstream 10.0kb downstream 1342 false Scaffold2783: 1-1342 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370903 5261 Brassicaceae View MSA
123832395 5264 Brassicales-Malvales View MSA
124344243 5266 SBM View MSA
124241053 5268 Malvidae View MSA
124063161 5270 Rosid View MSA
123738140 5271 Pentapetalae View MSA
122789213 5272 Eudicot View MSA
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain