Gene : Cagra.2848s0008 C. grandiflora v1.1
Defline:  (1 of 27) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  8
Name:  ? Cagra.2848s0008 Secondary Identifier:  ? PAC:28919671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2848s0008 0.5kb upstream 0.5kb upstream 3540 true Scaffold2848: 28123-31662 Capsella grandiflora
Cagra.2848s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2848: 31163-31662 Capsella grandiflora
Cagra.2848s0008 0.5kb downstream 0.5kb downstream 3540 true Scaffold2848: 27623-31162 Capsella grandiflora
Cagra.2848s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2848: 27623-28122 Capsella grandiflora
Cagra.2848s0008 1.0kb upstream 1.0kb upstream 4040 true Scaffold2848: 28123-32162 Capsella grandiflora
Cagra.2848s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2848: 31163-32162 Capsella grandiflora
Cagra.2848s0008 1.0kb downstream 1.0kb downstream 4040 true Scaffold2848: 27123-31162 Capsella grandiflora
Cagra.2848s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2848: 27123-28122 Capsella grandiflora
Cagra.2848s0008 2.0kb upstream 2.0kb upstream 5040 true Scaffold2848: 28123-33162 Capsella grandiflora
Cagra.2848s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2848: 31163-33162 Capsella grandiflora
Cagra.2848s0008 2.0kb downstream 2.0kb downstream 5040 true Scaffold2848: 26123-31162 Capsella grandiflora
Cagra.2848s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2848: 26123-28122 Capsella grandiflora
Cagra.2848s0008 5.0kb upstream 5.0kb upstream 8040 true Scaffold2848: 28123-36162 Capsella grandiflora
Cagra.2848s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2848: 31163-36162 Capsella grandiflora
Cagra.2848s0008 5.0kb downstream 5.0kb downstream 8040 true Scaffold2848: 23123-31162 Capsella grandiflora
Cagra.2848s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2848: 23123-28122 Capsella grandiflora
Cagra.2848s0008 10.0kb upstream 10.0kb upstream 13040 true Scaffold2848: 28123-41162 Capsella grandiflora
Cagra.2848s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2848: 31163-41162 Capsella grandiflora
Cagra.2848s0008 10.0kb downstream 10.0kb downstream 13040 true Scaffold2848: 18123-31162 Capsella grandiflora
Cagra.2848s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2848: 18123-28122 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343810 5261 Brassicaceae View MSA
123783907 5264 Brassicales-Malvales View MSA
124350645 5266 SBM View MSA
124237381 5268 Malvidae View MSA
124066554 5270 Rosid View MSA
123736416 5271 Pentapetalae View MSA
122796728 5272 Eudicot View MSA
122045085 5273 Angiosperm View MSA
121310395 5274 Embryophyte View MSA
123347889 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain