Gene : Cagra.2692s0017 C. grandiflora v1.1
Defline:  (1 of 3) K03145 - transcription elongation factor S-II (TFIIS) Genomic Order:  17
Name:  ? Cagra.2692s0017 Secondary Identifier:  ? PAC:28915841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2692s0017 0.5kb upstream 0.5kb upstream 4907 true Scaffold2692: 55061-59967 Capsella grandiflora
Cagra.2692s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold2692: 55061-55560 Capsella grandiflora
Cagra.2692s0017 0.5kb downstream 0.5kb downstream 4907 true Scaffold2692: 55561-60467 Capsella grandiflora
Cagra.2692s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold2692: 59968-60467 Capsella grandiflora
Cagra.2692s0017 1.0kb upstream 1.0kb upstream 5407 true Scaffold2692: 54561-59967 Capsella grandiflora
Cagra.2692s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold2692: 54561-55560 Capsella grandiflora
Cagra.2692s0017 1.0kb downstream 1.0kb downstream 5407 true Scaffold2692: 55561-60967 Capsella grandiflora
Cagra.2692s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold2692: 59968-60967 Capsella grandiflora
Cagra.2692s0017 2.0kb upstream 2.0kb upstream 6407 true Scaffold2692: 53561-59967 Capsella grandiflora
Cagra.2692s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold2692: 53561-55560 Capsella grandiflora
Cagra.2692s0017 2.0kb downstream 2.0kb downstream 6407 true Scaffold2692: 55561-61967 Capsella grandiflora
Cagra.2692s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold2692: 59968-61967 Capsella grandiflora
Cagra.2692s0017 5.0kb upstream 5.0kb upstream 9407 true Scaffold2692: 50561-59967 Capsella grandiflora
Cagra.2692s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold2692: 50561-55560 Capsella grandiflora
Cagra.2692s0017 5.0kb downstream 5.0kb downstream 9407 true Scaffold2692: 55561-64967 Capsella grandiflora
Cagra.2692s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold2692: 59968-64967 Capsella grandiflora
Cagra.2692s0017 10.0kb upstream 10.0kb upstream 14407 true Scaffold2692: 45561-59967 Capsella grandiflora
Cagra.2692s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold2692: 45561-55560 Capsella grandiflora
Cagra.2692s0017 10.0kb downstream 10.0kb downstream 14407 true Scaffold2692: 55561-69967 Capsella grandiflora
Cagra.2692s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold2692: 59968-69967 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362149 5261 Brassicaceae View MSA
123828905 5264 Brassicales-Malvales View MSA
124344967 5266 SBM View MSA
124242290 5268 Malvidae View MSA
124069018 5270 Rosid View MSA
123737080 5271 Pentapetalae View MSA
122788816 5272 Eudicot View MSA
122046561 5273 Angiosperm View MSA
121310623 5274 Embryophyte View MSA
123348060 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain