Gene : Cagra.2692s0019 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11208//PTHR11208:SF59 - RNA-BINDING PROTEIN RELATED Genomic Order:  19
Name:  ? Cagra.2692s0019 Secondary Identifier:  ? PAC:28915853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2692s0019 0.5kb upstream 0.5kb upstream 3424 true Scaffold2692: 62749-66172 Capsella grandiflora
Cagra.2692s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold2692: 65673-66172 Capsella grandiflora
Cagra.2692s0019 0.5kb downstream 0.5kb downstream 3424 true Scaffold2692: 62249-65672 Capsella grandiflora
Cagra.2692s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold2692: 62249-62748 Capsella grandiflora
Cagra.2692s0019 1.0kb upstream 1.0kb upstream 3924 true Scaffold2692: 62749-66672 Capsella grandiflora
Cagra.2692s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold2692: 65673-66672 Capsella grandiflora
Cagra.2692s0019 1.0kb downstream 1.0kb downstream 3924 true Scaffold2692: 61749-65672 Capsella grandiflora
Cagra.2692s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold2692: 61749-62748 Capsella grandiflora
Cagra.2692s0019 2.0kb upstream 2.0kb upstream 4924 true Scaffold2692: 62749-67672 Capsella grandiflora
Cagra.2692s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold2692: 65673-67672 Capsella grandiflora
Cagra.2692s0019 2.0kb downstream 2.0kb downstream 4924 true Scaffold2692: 60749-65672 Capsella grandiflora
Cagra.2692s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold2692: 60749-62748 Capsella grandiflora
Cagra.2692s0019 5.0kb upstream 5.0kb upstream 7924 true Scaffold2692: 62749-70672 Capsella grandiflora
Cagra.2692s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold2692: 65673-70672 Capsella grandiflora
Cagra.2692s0019 5.0kb downstream 5.0kb downstream 7924 true Scaffold2692: 57749-65672 Capsella grandiflora
Cagra.2692s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold2692: 57749-62748 Capsella grandiflora
Cagra.2692s0019 10.0kb upstream 10.0kb upstream 12924 true Scaffold2692: 62749-75672 Capsella grandiflora
Cagra.2692s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold2692: 65673-75672 Capsella grandiflora
Cagra.2692s0019 10.0kb downstream 10.0kb downstream 12924 true Scaffold2692: 52749-65672 Capsella grandiflora
Cagra.2692s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold2692: 52749-62748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371428 5261 Brassicaceae View MSA
123836230 5264 Brassicales-Malvales View MSA
124337389 5266 SBM View MSA
124240023 5268 Malvidae View MSA
124074646 5270 Rosid View MSA
123752463 5271 Pentapetalae View MSA
122791052 5272 Eudicot View MSA
122045750 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain