Gene : Cagra.2714s0001 C. grandiflora v1.1
Defline:  (1 of 12) PTHR31625:SF5 - ACYLTRANSFERASE-LIKE PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.2714s0001 Secondary Identifier:  ? PAC:28918500
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2714s0001 0.5kb upstream 0.5kb upstream 1837 true Scaffold2714: 7019-8855 Capsella grandiflora
Cagra.2714s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2714: 8356-8855 Capsella grandiflora
Cagra.2714s0001 0.5kb downstream 0.5kb downstream 1837 true Scaffold2714: 6519-8355 Capsella grandiflora
Cagra.2714s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2714: 6519-7018 Capsella grandiflora
Cagra.2714s0001 1.0kb upstream 1.0kb upstream 2337 true Scaffold2714: 7019-9355 Capsella grandiflora
Cagra.2714s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold2714: 8356-9355 Capsella grandiflora
Cagra.2714s0001 1.0kb downstream 1.0kb downstream 2337 true Scaffold2714: 6019-8355 Capsella grandiflora
Cagra.2714s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2714: 6019-7018 Capsella grandiflora
Cagra.2714s0001 2.0kb upstream 2.0kb upstream 3337 true Scaffold2714: 7019-10355 Capsella grandiflora
Cagra.2714s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold2714: 8356-10355 Capsella grandiflora
Cagra.2714s0001 2.0kb downstream 2.0kb downstream 3337 true Scaffold2714: 5019-8355 Capsella grandiflora
Cagra.2714s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2714: 5019-7018 Capsella grandiflora
Cagra.2714s0001 5.0kb upstream 5.0kb upstream 6337 true Scaffold2714: 7019-13355 Capsella grandiflora
Cagra.2714s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold2714: 8356-13355 Capsella grandiflora
Cagra.2714s0001 5.0kb downstream 5.0kb downstream 6337 true Scaffold2714: 2019-8355 Capsella grandiflora
Cagra.2714s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2714: 2019-7018 Capsella grandiflora
Cagra.2714s0001 10.0kb upstream 10.0kb upstream 11337 true Scaffold2714: 7019-18355 Capsella grandiflora
Cagra.2714s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold2714: 8356-18355 Capsella grandiflora
Cagra.2714s0001 10.0kb downstream 10.0kb downstream 8355 true Scaffold2714: 1-8355 Capsella grandiflora
Cagra.2714s0001 10.0kb downstream 10.0kb downstream 7018 false Scaffold2714: 1-7018 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380914 5261 Brassicaceae View MSA
123802967 5264 Brassicales-Malvales View MSA
124300112 5266 SBM View MSA
124151371 5268 Malvidae View MSA
124073771 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain