Gene : Cagra.2757s0001 C. grandiflora v1.1
Defline:  (1 of 1) KOG4585 - Predicted transposase Genomic Order:  1
Name:  ? Cagra.2757s0001 Secondary Identifier:  ? PAC:28901583
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2757s0001 0.5kb upstream 0.5kb upstream 3292 true Scaffold2757: 424-3715 Capsella grandiflora
Cagra.2757s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2757: 424-923 Capsella grandiflora
Cagra.2757s0001 0.5kb downstream 0.5kb downstream 3292 true Scaffold2757: 924-4215 Capsella grandiflora
Cagra.2757s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2757: 3716-4215 Capsella grandiflora
Cagra.2757s0001 1.0kb upstream 1.0kb upstream 3715 true Scaffold2757: 1-3715 Capsella grandiflora
Cagra.2757s0001 1.0kb upstream 1.0kb upstream 923 false Scaffold2757: 1-923 Capsella grandiflora
Cagra.2757s0001 1.0kb downstream 1.0kb downstream 3792 true Scaffold2757: 924-4715 Capsella grandiflora
Cagra.2757s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2757: 3716-4715 Capsella grandiflora
Cagra.2757s0001 2.0kb upstream 2.0kb upstream 3715 true Scaffold2757: 1-3715 Capsella grandiflora
Cagra.2757s0001 2.0kb upstream 2.0kb upstream 923 false Scaffold2757: 1-923 Capsella grandiflora
Cagra.2757s0001 2.0kb downstream 2.0kb downstream 4792 true Scaffold2757: 924-5715 Capsella grandiflora
Cagra.2757s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2757: 3716-5715 Capsella grandiflora
Cagra.2757s0001 5.0kb upstream 5.0kb upstream 3715 true Scaffold2757: 1-3715 Capsella grandiflora
Cagra.2757s0001 5.0kb upstream 5.0kb upstream 923 false Scaffold2757: 1-923 Capsella grandiflora
Cagra.2757s0001 5.0kb downstream 5.0kb downstream 7792 true Scaffold2757: 924-8715 Capsella grandiflora
Cagra.2757s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2757: 3716-8715 Capsella grandiflora
Cagra.2757s0001 10.0kb upstream 10.0kb upstream 3715 true Scaffold2757: 1-3715 Capsella grandiflora
Cagra.2757s0001 10.0kb upstream 10.0kb upstream 923 false Scaffold2757: 1-923 Capsella grandiflora
Cagra.2757s0001 10.0kb downstream 10.0kb downstream 12792 true Scaffold2757: 924-13715 Capsella grandiflora
Cagra.2757s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2757: 3716-13715 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496461 5273 Angiosperm Singleton cluster - no MSA
122333381 5261 Brassicaceae Singleton cluster - no MSA
123774331 5264 Brassicales-Malvales Singleton cluster - no MSA
124272778 5266 SBM Singleton cluster - no MSA
124128533 5268 Malvidae Singleton cluster - no MSA
123857226 5270 Rosid Singleton cluster - no MSA
123443061 5271 Pentapetalae Singleton cluster - no MSA
122478631 5272 Eudicot Singleton cluster - no MSA
120769822 5274 Embryophyte Singleton cluster - no MSA
122812190 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain