Gene : Cagra.2764s0001 C. grandiflora v1.1
Defline:  (1 of 4) 3.2.2.22 - rRNA N-glycosylase / rRNA N-glycosidase Genomic Order:  1
Name:  ? Cagra.2764s0001 Secondary Identifier:  ? PAC:28909996
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2764s0001 0.5kb upstream 0.5kb upstream 1526 true Scaffold2764: 228-1753 Capsella grandiflora
Cagra.2764s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold2764: 228-727 Capsella grandiflora
Cagra.2764s0001 0.5kb downstream 0.5kb downstream 1526 true Scaffold2764: 728-2253 Capsella grandiflora
Cagra.2764s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold2764: 1754-2253 Capsella grandiflora
Cagra.2764s0001 1.0kb upstream 1.0kb upstream 1753 true Scaffold2764: 1-1753 Capsella grandiflora
Cagra.2764s0001 1.0kb upstream 1.0kb upstream 727 false Scaffold2764: 1-727 Capsella grandiflora
Cagra.2764s0001 1.0kb downstream 1.0kb downstream 2026 true Scaffold2764: 728-2753 Capsella grandiflora
Cagra.2764s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold2764: 1754-2753 Capsella grandiflora
Cagra.2764s0001 2.0kb upstream 2.0kb upstream 1753 true Scaffold2764: 1-1753 Capsella grandiflora
Cagra.2764s0001 2.0kb upstream 2.0kb upstream 727 false Scaffold2764: 1-727 Capsella grandiflora
Cagra.2764s0001 2.0kb downstream 2.0kb downstream 3026 true Scaffold2764: 728-3753 Capsella grandiflora
Cagra.2764s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold2764: 1754-3753 Capsella grandiflora
Cagra.2764s0001 5.0kb upstream 5.0kb upstream 1753 true Scaffold2764: 1-1753 Capsella grandiflora
Cagra.2764s0001 5.0kb upstream 5.0kb upstream 727 false Scaffold2764: 1-727 Capsella grandiflora
Cagra.2764s0001 5.0kb downstream 5.0kb downstream 6026 true Scaffold2764: 728-6753 Capsella grandiflora
Cagra.2764s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold2764: 1754-6753 Capsella grandiflora
Cagra.2764s0001 10.0kb upstream 10.0kb upstream 1753 true Scaffold2764: 1-1753 Capsella grandiflora
Cagra.2764s0001 10.0kb upstream 10.0kb upstream 727 false Scaffold2764: 1-727 Capsella grandiflora
Cagra.2764s0001 10.0kb downstream 10.0kb downstream 11026 true Scaffold2764: 728-11753 Capsella grandiflora
Cagra.2764s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold2764: 1754-11753 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380325 5261 Brassicaceae View MSA
123802655 5264 Brassicales-Malvales View MSA
124349658 5266 SBM View MSA
124251807 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain