Gene : Cagra.2625s0017 C. grandiflora v1.1
Defline:  (1 of 9) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  17
Name:  ? Cagra.2625s0017 Secondary Identifier:  ? PAC:28897198
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2625s0017 0.5kb upstream 0.5kb upstream 2906 true Scaffold2625: 59718-62623 Capsella grandiflora
Cagra.2625s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold2625: 59718-60217 Capsella grandiflora
Cagra.2625s0017 0.5kb downstream 0.5kb downstream 2906 true Scaffold2625: 60218-63123 Capsella grandiflora
Cagra.2625s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold2625: 62624-63123 Capsella grandiflora
Cagra.2625s0017 1.0kb upstream 1.0kb upstream 3406 true Scaffold2625: 59218-62623 Capsella grandiflora
Cagra.2625s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold2625: 59218-60217 Capsella grandiflora
Cagra.2625s0017 1.0kb downstream 1.0kb downstream 3406 true Scaffold2625: 60218-63623 Capsella grandiflora
Cagra.2625s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold2625: 62624-63623 Capsella grandiflora
Cagra.2625s0017 2.0kb upstream 2.0kb upstream 4406 true Scaffold2625: 58218-62623 Capsella grandiflora
Cagra.2625s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold2625: 58218-60217 Capsella grandiflora
Cagra.2625s0017 2.0kb downstream 2.0kb downstream 4406 true Scaffold2625: 60218-64623 Capsella grandiflora
Cagra.2625s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold2625: 62624-64623 Capsella grandiflora
Cagra.2625s0017 5.0kb upstream 5.0kb upstream 7406 true Scaffold2625: 55218-62623 Capsella grandiflora
Cagra.2625s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold2625: 55218-60217 Capsella grandiflora
Cagra.2625s0017 5.0kb downstream 5.0kb downstream 7406 true Scaffold2625: 60218-67623 Capsella grandiflora
Cagra.2625s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold2625: 62624-67623 Capsella grandiflora
Cagra.2625s0017 10.0kb upstream 10.0kb upstream 12406 true Scaffold2625: 50218-62623 Capsella grandiflora
Cagra.2625s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold2625: 50218-60217 Capsella grandiflora
Cagra.2625s0017 10.0kb downstream 10.0kb downstream 12406 true Scaffold2625: 60218-72623 Capsella grandiflora
Cagra.2625s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold2625: 62624-72623 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363619 5261 Brassicaceae View MSA
123830884 5264 Brassicales-Malvales View MSA
124343782 5266 SBM View MSA
124240925 5268 Malvidae View MSA
124050409 5270 Rosid View MSA
123741518 5271 Pentapetalae View MSA
122787012 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain