Gene : Cagra.2629s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10584:SF181 - PUTATIVE-RELATED Genomic Order:  4
Name:  ? Cagra.2629s0004 Secondary Identifier:  ? PAC:28893543
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3801 Capsella grandiflora pathologic  
Cgrandiflora PWY-4101 Capsella grandiflora pathologic  
Cgrandiflora PWY-621 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2629s0004 0.5kb upstream 0.5kb upstream 2706 true Scaffold2629: 22459-25164 Capsella grandiflora
Cagra.2629s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2629: 24665-25164 Capsella grandiflora
Cagra.2629s0004 0.5kb downstream 0.5kb downstream 2706 true Scaffold2629: 21959-24664 Capsella grandiflora
Cagra.2629s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2629: 21959-22458 Capsella grandiflora
Cagra.2629s0004 1.0kb upstream 1.0kb upstream 3206 true Scaffold2629: 22459-25664 Capsella grandiflora
Cagra.2629s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2629: 24665-25664 Capsella grandiflora
Cagra.2629s0004 1.0kb downstream 1.0kb downstream 3206 true Scaffold2629: 21459-24664 Capsella grandiflora
Cagra.2629s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2629: 21459-22458 Capsella grandiflora
Cagra.2629s0004 2.0kb upstream 2.0kb upstream 4206 true Scaffold2629: 22459-26664 Capsella grandiflora
Cagra.2629s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2629: 24665-26664 Capsella grandiflora
Cagra.2629s0004 2.0kb downstream 2.0kb downstream 4206 true Scaffold2629: 20459-24664 Capsella grandiflora
Cagra.2629s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2629: 20459-22458 Capsella grandiflora
Cagra.2629s0004 5.0kb upstream 5.0kb upstream 7206 true Scaffold2629: 22459-29664 Capsella grandiflora
Cagra.2629s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2629: 24665-29664 Capsella grandiflora
Cagra.2629s0004 5.0kb downstream 5.0kb downstream 7206 true Scaffold2629: 17459-24664 Capsella grandiflora
Cagra.2629s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2629: 17459-22458 Capsella grandiflora
Cagra.2629s0004 10.0kb upstream 10.0kb upstream 12206 true Scaffold2629: 22459-34664 Capsella grandiflora
Cagra.2629s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2629: 24665-34664 Capsella grandiflora
Cagra.2629s0004 10.0kb downstream 10.0kb downstream 12206 true Scaffold2629: 12459-24664 Capsella grandiflora
Cagra.2629s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2629: 12459-22458 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369310 5261 Brassicaceae View MSA
123830203 5264 Brassicales-Malvales View MSA
124337784 5266 SBM View MSA
124254064 5268 Malvidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain