Gene : Cagra.2636s0007 C. grandiflora v1.1
Defline:  (1 of 2) PTHR16052:SF0 - TBCC DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  7
Name:  ? Cagra.2636s0007 Secondary Identifier:  ? PAC:28904982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2636s0007 0.5kb upstream 0.5kb upstream 4572 true Scaffold2636: 16151-20722 Capsella grandiflora
Cagra.2636s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2636: 20223-20722 Capsella grandiflora
Cagra.2636s0007 0.5kb downstream 0.5kb downstream 4572 true Scaffold2636: 15651-20222 Capsella grandiflora
Cagra.2636s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2636: 15651-16150 Capsella grandiflora
Cagra.2636s0007 1.0kb upstream 1.0kb upstream 5072 true Scaffold2636: 16151-21222 Capsella grandiflora
Cagra.2636s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2636: 20223-21222 Capsella grandiflora
Cagra.2636s0007 1.0kb downstream 1.0kb downstream 5072 true Scaffold2636: 15151-20222 Capsella grandiflora
Cagra.2636s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2636: 15151-16150 Capsella grandiflora
Cagra.2636s0007 2.0kb upstream 2.0kb upstream 6072 true Scaffold2636: 16151-22222 Capsella grandiflora
Cagra.2636s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2636: 20223-22222 Capsella grandiflora
Cagra.2636s0007 2.0kb downstream 2.0kb downstream 6072 true Scaffold2636: 14151-20222 Capsella grandiflora
Cagra.2636s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2636: 14151-16150 Capsella grandiflora
Cagra.2636s0007 5.0kb upstream 5.0kb upstream 9072 true Scaffold2636: 16151-25222 Capsella grandiflora
Cagra.2636s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2636: 20223-25222 Capsella grandiflora
Cagra.2636s0007 5.0kb downstream 5.0kb downstream 9072 true Scaffold2636: 11151-20222 Capsella grandiflora
Cagra.2636s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2636: 11151-16150 Capsella grandiflora
Cagra.2636s0007 10.0kb upstream 10.0kb upstream 14072 true Scaffold2636: 16151-30222 Capsella grandiflora
Cagra.2636s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2636: 20223-30222 Capsella grandiflora
Cagra.2636s0007 10.0kb downstream 10.0kb downstream 14072 true Scaffold2636: 6151-20222 Capsella grandiflora
Cagra.2636s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2636: 6151-16150 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362348 5261 Brassicaceae View MSA
123798352 5264 Brassicales-Malvales View MSA
124296002 5266 SBM View MSA
124247870 5268 Malvidae View MSA
124060607 5270 Rosid View MSA
123737607 5271 Pentapetalae View MSA
122797393 5272 Eudicot View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain