Gene : Cagra.2637s0023 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22950:SF313 - AMINO ACID TRANSPORTER FAMILY PROTEIN-RELATED Genomic Order:  23
Name:  ? Cagra.2637s0023 Secondary Identifier:  ? PAC:28899868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2637s0023 0.5kb upstream 0.5kb upstream 3417 true Scaffold2637: 74539-77955 Capsella grandiflora
Cagra.2637s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold2637: 74539-75038 Capsella grandiflora
Cagra.2637s0023 0.5kb downstream 0.5kb downstream 3417 true Scaffold2637: 75039-78455 Capsella grandiflora
Cagra.2637s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold2637: 77956-78455 Capsella grandiflora
Cagra.2637s0023 1.0kb upstream 1.0kb upstream 3917 true Scaffold2637: 74039-77955 Capsella grandiflora
Cagra.2637s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold2637: 74039-75038 Capsella grandiflora
Cagra.2637s0023 1.0kb downstream 1.0kb downstream 3917 true Scaffold2637: 75039-78955 Capsella grandiflora
Cagra.2637s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold2637: 77956-78955 Capsella grandiflora
Cagra.2637s0023 2.0kb upstream 2.0kb upstream 4917 true Scaffold2637: 73039-77955 Capsella grandiflora
Cagra.2637s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold2637: 73039-75038 Capsella grandiflora
Cagra.2637s0023 2.0kb downstream 2.0kb downstream 4123 true Scaffold2637: 75039-79161 Capsella grandiflora
Cagra.2637s0023 2.0kb downstream 2.0kb downstream 1206 false Scaffold2637: 77956-79161 Capsella grandiflora
Cagra.2637s0023 5.0kb upstream 5.0kb upstream 7917 true Scaffold2637: 70039-77955 Capsella grandiflora
Cagra.2637s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold2637: 70039-75038 Capsella grandiflora
Cagra.2637s0023 5.0kb downstream 5.0kb downstream 4123 true Scaffold2637: 75039-79161 Capsella grandiflora
Cagra.2637s0023 5.0kb downstream 5.0kb downstream 1206 false Scaffold2637: 77956-79161 Capsella grandiflora
Cagra.2637s0023 10.0kb upstream 10.0kb upstream 12917 true Scaffold2637: 65039-77955 Capsella grandiflora
Cagra.2637s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold2637: 65039-75038 Capsella grandiflora
Cagra.2637s0023 10.0kb downstream 10.0kb downstream 4123 true Scaffold2637: 75039-79161 Capsella grandiflora
Cagra.2637s0023 10.0kb downstream 10.0kb downstream 1206 false Scaffold2637: 77956-79161 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367868 5261 Brassicaceae View MSA
123834064 5264 Brassicales-Malvales View MSA
124344861 5266 SBM View MSA
124250275 5268 Malvidae View MSA
124050270 5270 Rosid View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain