Gene : Cagra.2654s0007 C. grandiflora v1.1
Defline:  (1 of 11) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  7
Name:  ? Cagra.2654s0007 Secondary Identifier:  ? PAC:28916858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2654s0007 0.5kb upstream 0.5kb upstream 3332 true Scaffold2654: 17068-20399 Capsella grandiflora
Cagra.2654s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold2654: 17068-17567 Capsella grandiflora
Cagra.2654s0007 0.5kb downstream 0.5kb downstream 3332 true Scaffold2654: 17568-20899 Capsella grandiflora
Cagra.2654s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold2654: 20400-20899 Capsella grandiflora
Cagra.2654s0007 1.0kb upstream 1.0kb upstream 3832 true Scaffold2654: 16568-20399 Capsella grandiflora
Cagra.2654s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold2654: 16568-17567 Capsella grandiflora
Cagra.2654s0007 1.0kb downstream 1.0kb downstream 3832 true Scaffold2654: 17568-21399 Capsella grandiflora
Cagra.2654s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold2654: 20400-21399 Capsella grandiflora
Cagra.2654s0007 2.0kb upstream 2.0kb upstream 4832 true Scaffold2654: 15568-20399 Capsella grandiflora
Cagra.2654s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold2654: 15568-17567 Capsella grandiflora
Cagra.2654s0007 2.0kb downstream 2.0kb downstream 4832 true Scaffold2654: 17568-22399 Capsella grandiflora
Cagra.2654s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold2654: 20400-22399 Capsella grandiflora
Cagra.2654s0007 5.0kb upstream 5.0kb upstream 7832 true Scaffold2654: 12568-20399 Capsella grandiflora
Cagra.2654s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold2654: 12568-17567 Capsella grandiflora
Cagra.2654s0007 5.0kb downstream 5.0kb downstream 7832 true Scaffold2654: 17568-25399 Capsella grandiflora
Cagra.2654s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold2654: 20400-25399 Capsella grandiflora
Cagra.2654s0007 10.0kb upstream 10.0kb upstream 12832 true Scaffold2654: 7568-20399 Capsella grandiflora
Cagra.2654s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold2654: 7568-17567 Capsella grandiflora
Cagra.2654s0007 10.0kb downstream 10.0kb downstream 12832 true Scaffold2654: 17568-30399 Capsella grandiflora
Cagra.2654s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold2654: 20400-30399 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370520 5261 Brassicaceae View MSA
123799979 5264 Brassicales-Malvales View MSA
124297445 5266 SBM View MSA
124149334 5268 Malvidae View MSA
123875159 5270 Rosid View MSA
123749810 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain