Gene : Cagra.2662s0008 C. grandiflora v1.1
Defline:  (1 of 1) PF00168//PF07002 - C2 domain (C2) // Copine (Copine) Genomic Order:  8
Name:  ? Cagra.2662s0008 Secondary Identifier:  ? PAC:28900692
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2662s0008 0.5kb upstream 0.5kb upstream 3970 true Scaffold2662: 28443-32412 Capsella grandiflora
Cagra.2662s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2662: 28443-28942 Capsella grandiflora
Cagra.2662s0008 0.5kb downstream 0.5kb downstream 3970 true Scaffold2662: 28943-32912 Capsella grandiflora
Cagra.2662s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2662: 32413-32912 Capsella grandiflora
Cagra.2662s0008 1.0kb upstream 1.0kb upstream 4470 true Scaffold2662: 27943-32412 Capsella grandiflora
Cagra.2662s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2662: 27943-28942 Capsella grandiflora
Cagra.2662s0008 1.0kb downstream 1.0kb downstream 4470 true Scaffold2662: 28943-33412 Capsella grandiflora
Cagra.2662s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2662: 32413-33412 Capsella grandiflora
Cagra.2662s0008 2.0kb upstream 2.0kb upstream 5470 true Scaffold2662: 26943-32412 Capsella grandiflora
Cagra.2662s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2662: 26943-28942 Capsella grandiflora
Cagra.2662s0008 2.0kb downstream 2.0kb downstream 5470 true Scaffold2662: 28943-34412 Capsella grandiflora
Cagra.2662s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2662: 32413-34412 Capsella grandiflora
Cagra.2662s0008 5.0kb upstream 5.0kb upstream 8470 true Scaffold2662: 23943-32412 Capsella grandiflora
Cagra.2662s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold2662: 23943-28942 Capsella grandiflora
Cagra.2662s0008 5.0kb downstream 5.0kb downstream 8470 true Scaffold2662: 28943-37412 Capsella grandiflora
Cagra.2662s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2662: 32413-37412 Capsella grandiflora
Cagra.2662s0008 10.0kb upstream 10.0kb upstream 13470 true Scaffold2662: 18943-32412 Capsella grandiflora
Cagra.2662s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold2662: 18943-28942 Capsella grandiflora
Cagra.2662s0008 10.0kb downstream 10.0kb downstream 13470 true Scaffold2662: 28943-42412 Capsella grandiflora
Cagra.2662s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2662: 32413-42412 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376204 5261 Brassicaceae View MSA
123837759 5264 Brassicales-Malvales View MSA
124322350 5266 SBM View MSA
124249800 5268 Malvidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain