Gene : Cagra.2584s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  5
Name:  ? Cagra.2584s0005 Secondary Identifier:  ? PAC:28916287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2584s0005 0.5kb upstream 0.5kb upstream 7146 true Scaffold2584: 17252-24397 Capsella grandiflora
Cagra.2584s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2584: 23898-24397 Capsella grandiflora
Cagra.2584s0005 0.5kb downstream 0.5kb downstream 7146 true Scaffold2584: 16752-23897 Capsella grandiflora
Cagra.2584s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2584: 16752-17251 Capsella grandiflora
Cagra.2584s0005 1.0kb upstream 1.0kb upstream 7646 true Scaffold2584: 17252-24897 Capsella grandiflora
Cagra.2584s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2584: 23898-24897 Capsella grandiflora
Cagra.2584s0005 1.0kb downstream 1.0kb downstream 7646 true Scaffold2584: 16252-23897 Capsella grandiflora
Cagra.2584s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2584: 16252-17251 Capsella grandiflora
Cagra.2584s0005 2.0kb upstream 2.0kb upstream 8646 true Scaffold2584: 17252-25897 Capsella grandiflora
Cagra.2584s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2584: 23898-25897 Capsella grandiflora
Cagra.2584s0005 2.0kb downstream 2.0kb downstream 8646 true Scaffold2584: 15252-23897 Capsella grandiflora
Cagra.2584s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2584: 15252-17251 Capsella grandiflora
Cagra.2584s0005 5.0kb upstream 5.0kb upstream 11646 true Scaffold2584: 17252-28897 Capsella grandiflora
Cagra.2584s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2584: 23898-28897 Capsella grandiflora
Cagra.2584s0005 5.0kb downstream 5.0kb downstream 11646 true Scaffold2584: 12252-23897 Capsella grandiflora
Cagra.2584s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2584: 12252-17251 Capsella grandiflora
Cagra.2584s0005 10.0kb upstream 10.0kb upstream 16646 true Scaffold2584: 17252-33897 Capsella grandiflora
Cagra.2584s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2584: 23898-33897 Capsella grandiflora
Cagra.2584s0005 10.0kb downstream 10.0kb downstream 16646 true Scaffold2584: 7252-23897 Capsella grandiflora
Cagra.2584s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2584: 7252-17251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370442 5261 Brassicaceae View MSA
123833054 5264 Brassicales-Malvales View MSA
124342572 5266 SBM View MSA
124252372 5268 Malvidae View MSA
124062272 5270 Rosid View MSA
123744034 5271 Pentapetalae View MSA
122788203 5272 Eudicot View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain