Gene : Cagra.2622s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11206:SF88 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  43
Name:  ? Cagra.2622s0043 Secondary Identifier:  ? PAC:28895949
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2622s0043 0.5kb upstream 0.5kb upstream 3932 true Scaffold2622: 127621-131552 Capsella grandiflora
Cagra.2622s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold2622: 131053-131552 Capsella grandiflora
Cagra.2622s0043 0.5kb downstream 0.5kb downstream 3932 true Scaffold2622: 127121-131052 Capsella grandiflora
Cagra.2622s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold2622: 127121-127620 Capsella grandiflora
Cagra.2622s0043 1.0kb upstream 1.0kb upstream 4432 true Scaffold2622: 127621-132052 Capsella grandiflora
Cagra.2622s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold2622: 131053-132052 Capsella grandiflora
Cagra.2622s0043 1.0kb downstream 1.0kb downstream 4432 true Scaffold2622: 126621-131052 Capsella grandiflora
Cagra.2622s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold2622: 126621-127620 Capsella grandiflora
Cagra.2622s0043 2.0kb upstream 2.0kb upstream 5432 true Scaffold2622: 127621-133052 Capsella grandiflora
Cagra.2622s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold2622: 131053-133052 Capsella grandiflora
Cagra.2622s0043 2.0kb downstream 2.0kb downstream 5432 true Scaffold2622: 125621-131052 Capsella grandiflora
Cagra.2622s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold2622: 125621-127620 Capsella grandiflora
Cagra.2622s0043 5.0kb upstream 5.0kb upstream 8432 true Scaffold2622: 127621-136052 Capsella grandiflora
Cagra.2622s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold2622: 131053-136052 Capsella grandiflora
Cagra.2622s0043 5.0kb downstream 5.0kb downstream 8432 true Scaffold2622: 122621-131052 Capsella grandiflora
Cagra.2622s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold2622: 122621-127620 Capsella grandiflora
Cagra.2622s0043 10.0kb upstream 10.0kb upstream 13432 true Scaffold2622: 127621-141052 Capsella grandiflora
Cagra.2622s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold2622: 131053-141052 Capsella grandiflora
Cagra.2622s0043 10.0kb downstream 10.0kb downstream 13432 true Scaffold2622: 117621-131052 Capsella grandiflora
Cagra.2622s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold2622: 117621-127620 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370670 5261 Brassicaceae View MSA
123839975 5264 Brassicales-Malvales View MSA
124340239 5266 SBM View MSA
124251787 5268 Malvidae View MSA
124071772 5270 Rosid View MSA
123747983 5271 Pentapetalae View MSA
122786922 5272 Eudicot View MSA
122050249 5273 Angiosperm View MSA
121311823 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain