Gene : Cagra.2622s0042 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  42
Name:  ? Cagra.2622s0042 Secondary Identifier:  ? PAC:28895945
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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2622s0042 0.5kb upstream 0.5kb upstream 2405 true Scaffold2622: 124142-126546 Capsella grandiflora
Cagra.2622s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold2622: 126047-126546 Capsella grandiflora
Cagra.2622s0042 0.5kb downstream 0.5kb downstream 2405 true Scaffold2622: 123642-126046 Capsella grandiflora
Cagra.2622s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold2622: 123642-124141 Capsella grandiflora
Cagra.2622s0042 1.0kb upstream 1.0kb upstream 2905 true Scaffold2622: 124142-127046 Capsella grandiflora
Cagra.2622s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold2622: 126047-127046 Capsella grandiflora
Cagra.2622s0042 1.0kb downstream 1.0kb downstream 2905 true Scaffold2622: 123142-126046 Capsella grandiflora
Cagra.2622s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold2622: 123142-124141 Capsella grandiflora
Cagra.2622s0042 2.0kb upstream 2.0kb upstream 3905 true Scaffold2622: 124142-128046 Capsella grandiflora
Cagra.2622s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold2622: 126047-128046 Capsella grandiflora
Cagra.2622s0042 2.0kb downstream 2.0kb downstream 3905 true Scaffold2622: 122142-126046 Capsella grandiflora
Cagra.2622s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold2622: 122142-124141 Capsella grandiflora
Cagra.2622s0042 5.0kb upstream 5.0kb upstream 6905 true Scaffold2622: 124142-131046 Capsella grandiflora
Cagra.2622s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold2622: 126047-131046 Capsella grandiflora
Cagra.2622s0042 5.0kb downstream 5.0kb downstream 6905 true Scaffold2622: 119142-126046 Capsella grandiflora
Cagra.2622s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold2622: 119142-124141 Capsella grandiflora
Cagra.2622s0042 10.0kb upstream 10.0kb upstream 11905 true Scaffold2622: 124142-136046 Capsella grandiflora
Cagra.2622s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold2622: 126047-136046 Capsella grandiflora
Cagra.2622s0042 10.0kb downstream 10.0kb downstream 11905 true Scaffold2622: 114142-126046 Capsella grandiflora
Cagra.2622s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold2622: 114142-124141 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
122362605 5261 Brassicaceae View MSA
123840264 5264 Brassicales-Malvales View MSA
124342480 5266 SBM View MSA
124243915 5268 Malvidae View MSA
124062930 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain