Gene : Cagra.2625s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31446:SF5 - ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN Genomic Order:  9
Name:  ? Cagra.2625s0009 Secondary Identifier:  ? PAC:28897210
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Ontology Annotation Displayer

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Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2625s0009 0.5kb upstream 0.5kb upstream 2381 true Scaffold2625: 32545-34925 Capsella grandiflora
Cagra.2625s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2625: 34426-34925 Capsella grandiflora
Cagra.2625s0009 0.5kb downstream 0.5kb downstream 2381 true Scaffold2625: 32045-34425 Capsella grandiflora
Cagra.2625s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2625: 32045-32544 Capsella grandiflora
Cagra.2625s0009 1.0kb upstream 1.0kb upstream 2881 true Scaffold2625: 32545-35425 Capsella grandiflora
Cagra.2625s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2625: 34426-35425 Capsella grandiflora
Cagra.2625s0009 1.0kb downstream 1.0kb downstream 2881 true Scaffold2625: 31545-34425 Capsella grandiflora
Cagra.2625s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2625: 31545-32544 Capsella grandiflora
Cagra.2625s0009 2.0kb upstream 2.0kb upstream 3881 true Scaffold2625: 32545-36425 Capsella grandiflora
Cagra.2625s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2625: 34426-36425 Capsella grandiflora
Cagra.2625s0009 2.0kb downstream 2.0kb downstream 3881 true Scaffold2625: 30545-34425 Capsella grandiflora
Cagra.2625s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2625: 30545-32544 Capsella grandiflora
Cagra.2625s0009 5.0kb upstream 5.0kb upstream 6881 true Scaffold2625: 32545-39425 Capsella grandiflora
Cagra.2625s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2625: 34426-39425 Capsella grandiflora
Cagra.2625s0009 5.0kb downstream 5.0kb downstream 6881 true Scaffold2625: 27545-34425 Capsella grandiflora
Cagra.2625s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2625: 27545-32544 Capsella grandiflora
Cagra.2625s0009 10.0kb upstream 10.0kb upstream 11881 true Scaffold2625: 32545-44425 Capsella grandiflora
Cagra.2625s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2625: 34426-44425 Capsella grandiflora
Cagra.2625s0009 10.0kb downstream 10.0kb downstream 11881 true Scaffold2625: 22545-34425 Capsella grandiflora
Cagra.2625s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2625: 22545-32544 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379669 5261 Brassicaceae View MSA
123838306 5264 Brassicales-Malvales View MSA
124345471 5266 SBM View MSA
124251459 5268 Malvidae View MSA
124064436 5270 Rosid View MSA
123747764 5271 Pentapetalae View MSA
122794192 5272 Eudicot View MSA
122050620 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121350526 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain