Gene : Cagra.2489s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12042//PTHR12042:SF13 - LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE Genomic Order:  8
Name:  ? Cagra.2489s0008 Secondary Identifier:  ? PAC:28901191
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2489s0008 0.5kb upstream 0.5kb upstream 2717 true Scaffold2489: 18452-21168 Capsella grandiflora
Cagra.2489s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold2489: 20669-21168 Capsella grandiflora
Cagra.2489s0008 0.5kb downstream 0.5kb downstream 2717 true Scaffold2489: 17952-20668 Capsella grandiflora
Cagra.2489s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold2489: 17952-18451 Capsella grandiflora
Cagra.2489s0008 1.0kb upstream 1.0kb upstream 3217 true Scaffold2489: 18452-21668 Capsella grandiflora
Cagra.2489s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold2489: 20669-21668 Capsella grandiflora
Cagra.2489s0008 1.0kb downstream 1.0kb downstream 3217 true Scaffold2489: 17452-20668 Capsella grandiflora
Cagra.2489s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold2489: 17452-18451 Capsella grandiflora
Cagra.2489s0008 2.0kb upstream 2.0kb upstream 4217 true Scaffold2489: 18452-22668 Capsella grandiflora
Cagra.2489s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold2489: 20669-22668 Capsella grandiflora
Cagra.2489s0008 2.0kb downstream 2.0kb downstream 4217 true Scaffold2489: 16452-20668 Capsella grandiflora
Cagra.2489s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold2489: 16452-18451 Capsella grandiflora
Cagra.2489s0008 5.0kb upstream 5.0kb upstream 6166 true Scaffold2489: 18452-24617 Capsella grandiflora
Cagra.2489s0008 5.0kb upstream 5.0kb upstream 3949 false Scaffold2489: 20669-24617 Capsella grandiflora
Cagra.2489s0008 5.0kb downstream 5.0kb downstream 7217 true Scaffold2489: 13452-20668 Capsella grandiflora
Cagra.2489s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold2489: 13452-18451 Capsella grandiflora
Cagra.2489s0008 10.0kb upstream 10.0kb upstream 6166 true Scaffold2489: 18452-24617 Capsella grandiflora
Cagra.2489s0008 10.0kb upstream 10.0kb upstream 3949 false Scaffold2489: 20669-24617 Capsella grandiflora
Cagra.2489s0008 10.0kb downstream 10.0kb downstream 12217 true Scaffold2489: 8452-20668 Capsella grandiflora
Cagra.2489s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold2489: 8452-18451 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378621 5261 Brassicaceae View MSA
123836905 5264 Brassicales-Malvales View MSA
124346890 5266 SBM View MSA
124245543 5268 Malvidae View MSA
124070707 5270 Rosid View MSA
123741933 5271 Pentapetalae View MSA
122794617 5272 Eudicot View MSA
122048319 5273 Angiosperm View MSA
121348346 5274 Embryophyte View MSA
123380826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain