Gene : Cagra.2494s0014 C. grandiflora v1.1
Defline:  (1 of 5) KOG3140 - Predicted membrane protein Genomic Order:  14
Name:  ? Cagra.2494s0014 Secondary Identifier:  ? PAC:28913713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2494s0014 0.5kb upstream 0.5kb upstream 3006 true Scaffold2494: 58598-61603 Capsella grandiflora
Cagra.2494s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold2494: 61104-61603 Capsella grandiflora
Cagra.2494s0014 0.5kb downstream 0.5kb downstream 3006 true Scaffold2494: 58098-61103 Capsella grandiflora
Cagra.2494s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold2494: 58098-58597 Capsella grandiflora
Cagra.2494s0014 1.0kb upstream 1.0kb upstream 3506 true Scaffold2494: 58598-62103 Capsella grandiflora
Cagra.2494s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold2494: 61104-62103 Capsella grandiflora
Cagra.2494s0014 1.0kb downstream 1.0kb downstream 3506 true Scaffold2494: 57598-61103 Capsella grandiflora
Cagra.2494s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold2494: 57598-58597 Capsella grandiflora
Cagra.2494s0014 2.0kb upstream 2.0kb upstream 4506 true Scaffold2494: 58598-63103 Capsella grandiflora
Cagra.2494s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold2494: 61104-63103 Capsella grandiflora
Cagra.2494s0014 2.0kb downstream 2.0kb downstream 4506 true Scaffold2494: 56598-61103 Capsella grandiflora
Cagra.2494s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold2494: 56598-58597 Capsella grandiflora
Cagra.2494s0014 5.0kb upstream 5.0kb upstream 7506 true Scaffold2494: 58598-66103 Capsella grandiflora
Cagra.2494s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold2494: 61104-66103 Capsella grandiflora
Cagra.2494s0014 5.0kb downstream 5.0kb downstream 7506 true Scaffold2494: 53598-61103 Capsella grandiflora
Cagra.2494s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold2494: 53598-58597 Capsella grandiflora
Cagra.2494s0014 10.0kb upstream 10.0kb upstream 12506 true Scaffold2494: 58598-71103 Capsella grandiflora
Cagra.2494s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold2494: 61104-71103 Capsella grandiflora
Cagra.2494s0014 10.0kb downstream 10.0kb downstream 12506 true Scaffold2494: 48598-61103 Capsella grandiflora
Cagra.2494s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold2494: 48598-58597 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373190 5261 Brassicaceae View MSA
123832301 5264 Brassicales-Malvales View MSA
124341060 5266 SBM View MSA
124250793 5268 Malvidae View MSA
124066129 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain