Gene : Cagra.2494s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11772:SF18 - ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS Genomic Order:  4
Name:  ? Cagra.2494s0004 Secondary Identifier:  ? PAC:28913714
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2494s0004 0.5kb upstream 0.5kb upstream 3148 true Scaffold2494: 7052-10199 Capsella grandiflora
Cagra.2494s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2494: 9700-10199 Capsella grandiflora
Cagra.2494s0004 0.5kb downstream 0.5kb downstream 3148 true Scaffold2494: 6552-9699 Capsella grandiflora
Cagra.2494s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2494: 6552-7051 Capsella grandiflora
Cagra.2494s0004 1.0kb upstream 1.0kb upstream 3648 true Scaffold2494: 7052-10699 Capsella grandiflora
Cagra.2494s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2494: 9700-10699 Capsella grandiflora
Cagra.2494s0004 1.0kb downstream 1.0kb downstream 3648 true Scaffold2494: 6052-9699 Capsella grandiflora
Cagra.2494s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2494: 6052-7051 Capsella grandiflora
Cagra.2494s0004 2.0kb upstream 2.0kb upstream 4648 true Scaffold2494: 7052-11699 Capsella grandiflora
Cagra.2494s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2494: 9700-11699 Capsella grandiflora
Cagra.2494s0004 2.0kb downstream 2.0kb downstream 4648 true Scaffold2494: 5052-9699 Capsella grandiflora
Cagra.2494s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2494: 5052-7051 Capsella grandiflora
Cagra.2494s0004 5.0kb upstream 5.0kb upstream 7648 true Scaffold2494: 7052-14699 Capsella grandiflora
Cagra.2494s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2494: 9700-14699 Capsella grandiflora
Cagra.2494s0004 5.0kb downstream 5.0kb downstream 7648 true Scaffold2494: 2052-9699 Capsella grandiflora
Cagra.2494s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2494: 2052-7051 Capsella grandiflora
Cagra.2494s0004 10.0kb upstream 10.0kb upstream 12648 true Scaffold2494: 7052-19699 Capsella grandiflora
Cagra.2494s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2494: 9700-19699 Capsella grandiflora
Cagra.2494s0004 10.0kb downstream 10.0kb downstream 9699 true Scaffold2494: 1-9699 Capsella grandiflora
Cagra.2494s0004 10.0kb downstream 10.0kb downstream 7051 false Scaffold2494: 1-7051 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375300 5261 Brassicaceae View MSA
123830989 5264 Brassicales-Malvales View MSA
124341290 5266 SBM View MSA
124252257 5268 Malvidae View MSA
124063180 5270 Rosid View MSA
123737822 5271 Pentapetalae View MSA
122787966 5272 Eudicot View MSA
122049991 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain