Gene : Cagra.2495s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.2495s0005 Secondary Identifier:  ? PAC:28895891
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2495s0005 0.5kb upstream 0.5kb upstream 4943 true Scaffold2495: 24578-29520 Capsella grandiflora
Cagra.2495s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2495: 24578-25077 Capsella grandiflora
Cagra.2495s0005 0.5kb downstream 0.5kb downstream 4943 true Scaffold2495: 25078-30020 Capsella grandiflora
Cagra.2495s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2495: 29521-30020 Capsella grandiflora
Cagra.2495s0005 1.0kb upstream 1.0kb upstream 5443 true Scaffold2495: 24078-29520 Capsella grandiflora
Cagra.2495s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2495: 24078-25077 Capsella grandiflora
Cagra.2495s0005 1.0kb downstream 1.0kb downstream 5443 true Scaffold2495: 25078-30520 Capsella grandiflora
Cagra.2495s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2495: 29521-30520 Capsella grandiflora
Cagra.2495s0005 2.0kb upstream 2.0kb upstream 6443 true Scaffold2495: 23078-29520 Capsella grandiflora
Cagra.2495s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2495: 23078-25077 Capsella grandiflora
Cagra.2495s0005 2.0kb downstream 2.0kb downstream 6443 true Scaffold2495: 25078-31520 Capsella grandiflora
Cagra.2495s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2495: 29521-31520 Capsella grandiflora
Cagra.2495s0005 5.0kb upstream 5.0kb upstream 9443 true Scaffold2495: 20078-29520 Capsella grandiflora
Cagra.2495s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2495: 20078-25077 Capsella grandiflora
Cagra.2495s0005 5.0kb downstream 5.0kb downstream 9443 true Scaffold2495: 25078-34520 Capsella grandiflora
Cagra.2495s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2495: 29521-34520 Capsella grandiflora
Cagra.2495s0005 10.0kb upstream 10.0kb upstream 14443 true Scaffold2495: 15078-29520 Capsella grandiflora
Cagra.2495s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2495: 15078-25077 Capsella grandiflora
Cagra.2495s0005 10.0kb downstream 10.0kb downstream 14443 true Scaffold2495: 25078-39520 Capsella grandiflora
Cagra.2495s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2495: 29521-39520 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379971 5261 Brassicaceae View MSA
123802500 5264 Brassicales-Malvales View MSA
124299690 5266 SBM View MSA
124251454 5268 Malvidae View MSA
124073385 5270 Rosid View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain