Gene : Cagra.2539s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Genomic Order:  2
Name:  ? Cagra.2539s0002 Secondary Identifier:  ? PAC:28918817
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2539s0002 0.5kb upstream 0.5kb upstream 2869 true Scaffold2539: 5041-7909 Capsella grandiflora
Cagra.2539s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2539: 7410-7909 Capsella grandiflora
Cagra.2539s0002 0.5kb downstream 0.5kb downstream 2869 true Scaffold2539: 4541-7409 Capsella grandiflora
Cagra.2539s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2539: 4541-5040 Capsella grandiflora
Cagra.2539s0002 1.0kb upstream 1.0kb upstream 3369 true Scaffold2539: 5041-8409 Capsella grandiflora
Cagra.2539s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2539: 7410-8409 Capsella grandiflora
Cagra.2539s0002 1.0kb downstream 1.0kb downstream 3369 true Scaffold2539: 4041-7409 Capsella grandiflora
Cagra.2539s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2539: 4041-5040 Capsella grandiflora
Cagra.2539s0002 2.0kb upstream 2.0kb upstream 4369 true Scaffold2539: 5041-9409 Capsella grandiflora
Cagra.2539s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2539: 7410-9409 Capsella grandiflora
Cagra.2539s0002 2.0kb downstream 2.0kb downstream 4369 true Scaffold2539: 3041-7409 Capsella grandiflora
Cagra.2539s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2539: 3041-5040 Capsella grandiflora
Cagra.2539s0002 5.0kb upstream 5.0kb upstream 7369 true Scaffold2539: 5041-12409 Capsella grandiflora
Cagra.2539s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2539: 7410-12409 Capsella grandiflora
Cagra.2539s0002 5.0kb downstream 5.0kb downstream 7369 true Scaffold2539: 41-7409 Capsella grandiflora
Cagra.2539s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2539: 41-5040 Capsella grandiflora
Cagra.2539s0002 10.0kb upstream 10.0kb upstream 7777 true Scaffold2539: 5041-12817 Capsella grandiflora
Cagra.2539s0002 10.0kb upstream 10.0kb upstream 5408 false Scaffold2539: 7410-12817 Capsella grandiflora
Cagra.2539s0002 10.0kb downstream 10.0kb downstream 7409 true Scaffold2539: 1-7409 Capsella grandiflora
Cagra.2539s0002 10.0kb downstream 10.0kb downstream 5040 false Scaffold2539: 1-5040 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376986 5261 Brassicaceae View MSA
123839142 5264 Brassicales-Malvales View MSA
124347446 5266 SBM View MSA
124245444 5268 Malvidae View MSA
124070966 5270 Rosid View MSA
123742904 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain