Gene : Cagra.3373s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Genomic Order:  11
Name:  ? Cagra.3373s0011 Secondary Identifier:  ? PAC:28894185
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0011 0.5kb upstream 0.5kb upstream 4442 true Scaffold3373: 37169-41610 Capsella grandiflora
Cagra.3373s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 37169-37668 Capsella grandiflora
Cagra.3373s0011 0.5kb downstream 0.5kb downstream 4442 true Scaffold3373: 37669-42110 Capsella grandiflora
Cagra.3373s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 41611-42110 Capsella grandiflora
Cagra.3373s0011 1.0kb upstream 1.0kb upstream 4942 true Scaffold3373: 36669-41610 Capsella grandiflora
Cagra.3373s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 36669-37668 Capsella grandiflora
Cagra.3373s0011 1.0kb downstream 1.0kb downstream 4942 true Scaffold3373: 37669-42610 Capsella grandiflora
Cagra.3373s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 41611-42610 Capsella grandiflora
Cagra.3373s0011 2.0kb upstream 2.0kb upstream 5942 true Scaffold3373: 35669-41610 Capsella grandiflora
Cagra.3373s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 35669-37668 Capsella grandiflora
Cagra.3373s0011 2.0kb downstream 2.0kb downstream 5942 true Scaffold3373: 37669-43610 Capsella grandiflora
Cagra.3373s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 41611-43610 Capsella grandiflora
Cagra.3373s0011 5.0kb upstream 5.0kb upstream 8942 true Scaffold3373: 32669-41610 Capsella grandiflora
Cagra.3373s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 32669-37668 Capsella grandiflora
Cagra.3373s0011 5.0kb downstream 5.0kb downstream 8942 true Scaffold3373: 37669-46610 Capsella grandiflora
Cagra.3373s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 41611-46610 Capsella grandiflora
Cagra.3373s0011 10.0kb upstream 10.0kb upstream 13942 true Scaffold3373: 27669-41610 Capsella grandiflora
Cagra.3373s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 27669-37668 Capsella grandiflora
Cagra.3373s0011 10.0kb downstream 10.0kb downstream 13942 true Scaffold3373: 37669-51610 Capsella grandiflora
Cagra.3373s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 41611-51610 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122360699 5261 Brassicaceae View MSA
123828719 5264 Brassicales-Malvales View MSA
124351073 5266 SBM View MSA
124247968 5268 Malvidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain