Gene : Cagra.3373s0015 C. grandiflora v1.1
Defline:  (1 of 6) PTHR22849:SF50 - U-BOX DOMAIN-CONTAINING PROTEIN 36-RELATED Genomic Order:  15
Name:  ? Cagra.3373s0015 Secondary Identifier:  ? PAC:28894167
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0015 0.5kb upstream 0.5kb upstream 2739 true Scaffold3373: 49388-52126 Capsella grandiflora
Cagra.3373s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 51627-52126 Capsella grandiflora
Cagra.3373s0015 0.5kb downstream 0.5kb downstream 2739 true Scaffold3373: 48888-51626 Capsella grandiflora
Cagra.3373s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 48888-49387 Capsella grandiflora
Cagra.3373s0015 1.0kb upstream 1.0kb upstream 3239 true Scaffold3373: 49388-52626 Capsella grandiflora
Cagra.3373s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 51627-52626 Capsella grandiflora
Cagra.3373s0015 1.0kb downstream 1.0kb downstream 3239 true Scaffold3373: 48388-51626 Capsella grandiflora
Cagra.3373s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 48388-49387 Capsella grandiflora
Cagra.3373s0015 2.0kb upstream 2.0kb upstream 4239 true Scaffold3373: 49388-53626 Capsella grandiflora
Cagra.3373s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 51627-53626 Capsella grandiflora
Cagra.3373s0015 2.0kb downstream 2.0kb downstream 4239 true Scaffold3373: 47388-51626 Capsella grandiflora
Cagra.3373s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 47388-49387 Capsella grandiflora
Cagra.3373s0015 5.0kb upstream 5.0kb upstream 7239 true Scaffold3373: 49388-56626 Capsella grandiflora
Cagra.3373s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 51627-56626 Capsella grandiflora
Cagra.3373s0015 5.0kb downstream 5.0kb downstream 7239 true Scaffold3373: 44388-51626 Capsella grandiflora
Cagra.3373s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 44388-49387 Capsella grandiflora
Cagra.3373s0015 10.0kb upstream 10.0kb upstream 12239 true Scaffold3373: 49388-61626 Capsella grandiflora
Cagra.3373s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 51627-61626 Capsella grandiflora
Cagra.3373s0015 10.0kb downstream 10.0kb downstream 12239 true Scaffold3373: 39388-51626 Capsella grandiflora
Cagra.3373s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 39388-49387 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028010 5273 Angiosperm View MSA
122373568 5261 Brassicaceae View MSA
123800579 5264 Brassicales-Malvales View MSA
124297980 5266 SBM View MSA
124252290 5268 Malvidae View MSA
124050747 5270 Rosid View MSA
123742120 5271 Pentapetalae View MSA
122770207 5272 Eudicot View MSA
121297566 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain