Gene : Cagra.3373s0033 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21660//PTHR21660:SF12 - THIOESTERASE SUPERFAMILY MEMBER-RELATED Genomic Order:  33
Name:  ? Cagra.3373s0033 Secondary Identifier:  ? PAC:28894179
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1121 Capsella grandiflora pathologic  
Cgrandiflora PWY-321 Capsella grandiflora pathologic  
Cgrandiflora PWY-5148 Capsella grandiflora pathologic  
Cgrandiflora PWY-6733 Capsella grandiflora pathologic  
Cgrandiflora PWY-735 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0033 0.5kb upstream 0.5kb upstream 1432 true Scaffold3373: 102927-104358 Capsella grandiflora
Cagra.3373s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 102927-103426 Capsella grandiflora
Cagra.3373s0033 0.5kb downstream 0.5kb downstream 1432 true Scaffold3373: 103427-104858 Capsella grandiflora
Cagra.3373s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 104359-104858 Capsella grandiflora
Cagra.3373s0033 1.0kb upstream 1.0kb upstream 1932 true Scaffold3373: 102427-104358 Capsella grandiflora
Cagra.3373s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 102427-103426 Capsella grandiflora
Cagra.3373s0033 1.0kb downstream 1.0kb downstream 1932 true Scaffold3373: 103427-105358 Capsella grandiflora
Cagra.3373s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 104359-105358 Capsella grandiflora
Cagra.3373s0033 2.0kb upstream 2.0kb upstream 2932 true Scaffold3373: 101427-104358 Capsella grandiflora
Cagra.3373s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 101427-103426 Capsella grandiflora
Cagra.3373s0033 2.0kb downstream 2.0kb downstream 2932 true Scaffold3373: 103427-106358 Capsella grandiflora
Cagra.3373s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 104359-106358 Capsella grandiflora
Cagra.3373s0033 5.0kb upstream 5.0kb upstream 5932 true Scaffold3373: 98427-104358 Capsella grandiflora
Cagra.3373s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 98427-103426 Capsella grandiflora
Cagra.3373s0033 5.0kb downstream 5.0kb downstream 5932 true Scaffold3373: 103427-109358 Capsella grandiflora
Cagra.3373s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 104359-109358 Capsella grandiflora
Cagra.3373s0033 10.0kb upstream 10.0kb upstream 10932 true Scaffold3373: 93427-104358 Capsella grandiflora
Cagra.3373s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 93427-103426 Capsella grandiflora
Cagra.3373s0033 10.0kb downstream 10.0kb downstream 10932 true Scaffold3373: 103427-114358 Capsella grandiflora
Cagra.3373s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 104359-114358 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363895 5261 Brassicaceae View MSA
123827579 5264 Brassicales-Malvales View MSA
124351057 5266 SBM View MSA
124244489 5268 Malvidae View MSA
124063594 5270 Rosid View MSA
123749451 5271 Pentapetalae View MSA
122793773 5272 Eudicot View MSA
122044050 5273 Angiosperm View MSA
121310231 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain