Gene : Cagra.3373s0052 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33601:SF1 - LITTLE ZIPPER 1 PROTEIN-RELATED Genomic Order:  52
Name:  ? Cagra.3373s0052 Secondary Identifier:  ? PAC:28894219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3373s0052 0.5kb upstream 0.5kb upstream 1078 true Scaffold3373: 185316-186393 Capsella grandiflora
Cagra.3373s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold3373: 185316-185815 Capsella grandiflora
Cagra.3373s0052 0.5kb downstream 0.5kb downstream 1078 true Scaffold3373: 185816-186893 Capsella grandiflora
Cagra.3373s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold3373: 186394-186893 Capsella grandiflora
Cagra.3373s0052 1.0kb upstream 1.0kb upstream 1578 true Scaffold3373: 184816-186393 Capsella grandiflora
Cagra.3373s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold3373: 184816-185815 Capsella grandiflora
Cagra.3373s0052 1.0kb downstream 1.0kb downstream 1578 true Scaffold3373: 185816-187393 Capsella grandiflora
Cagra.3373s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold3373: 186394-187393 Capsella grandiflora
Cagra.3373s0052 2.0kb upstream 2.0kb upstream 2578 true Scaffold3373: 183816-186393 Capsella grandiflora
Cagra.3373s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold3373: 183816-185815 Capsella grandiflora
Cagra.3373s0052 2.0kb downstream 2.0kb downstream 2578 true Scaffold3373: 185816-188393 Capsella grandiflora
Cagra.3373s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold3373: 186394-188393 Capsella grandiflora
Cagra.3373s0052 5.0kb upstream 5.0kb upstream 5578 true Scaffold3373: 180816-186393 Capsella grandiflora
Cagra.3373s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold3373: 180816-185815 Capsella grandiflora
Cagra.3373s0052 5.0kb downstream 5.0kb downstream 5578 true Scaffold3373: 185816-191393 Capsella grandiflora
Cagra.3373s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold3373: 186394-191393 Capsella grandiflora
Cagra.3373s0052 10.0kb upstream 10.0kb upstream 10578 true Scaffold3373: 175816-186393 Capsella grandiflora
Cagra.3373s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold3373: 175816-185815 Capsella grandiflora
Cagra.3373s0052 10.0kb downstream 10.0kb downstream 10578 true Scaffold3373: 185816-196393 Capsella grandiflora
Cagra.3373s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold3373: 186394-196393 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041483 5273 Angiosperm View MSA
122376623 5261 Brassicaceae View MSA
123841366 5264 Brassicales-Malvales View MSA
124347550 5266 SBM View MSA
124250635 5268 Malvidae View MSA
124070399 5270 Rosid View MSA
123743735 5271 Pentapetalae View MSA
122787347 5272 Eudicot View MSA
121309855 5274 Embryophyte View MSA
123347500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain