Gene : Cagra.3380s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15744 - BLOM7 Genomic Order:  5
Name:  ? Cagra.3380s0005 Secondary Identifier:  ? PAC:28917769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3380s0005 0.5kb upstream 0.5kb upstream 5359 true Scaffold3380: 13587-18945 Capsella grandiflora
Cagra.3380s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3380: 13587-14086 Capsella grandiflora
Cagra.3380s0005 0.5kb downstream 0.5kb downstream 5359 true Scaffold3380: 14087-19445 Capsella grandiflora
Cagra.3380s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3380: 18946-19445 Capsella grandiflora
Cagra.3380s0005 1.0kb upstream 1.0kb upstream 5859 true Scaffold3380: 13087-18945 Capsella grandiflora
Cagra.3380s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3380: 13087-14086 Capsella grandiflora
Cagra.3380s0005 1.0kb downstream 1.0kb downstream 5859 true Scaffold3380: 14087-19945 Capsella grandiflora
Cagra.3380s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3380: 18946-19945 Capsella grandiflora
Cagra.3380s0005 2.0kb upstream 2.0kb upstream 6859 true Scaffold3380: 12087-18945 Capsella grandiflora
Cagra.3380s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3380: 12087-14086 Capsella grandiflora
Cagra.3380s0005 2.0kb downstream 2.0kb downstream 6859 true Scaffold3380: 14087-20945 Capsella grandiflora
Cagra.3380s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3380: 18946-20945 Capsella grandiflora
Cagra.3380s0005 5.0kb upstream 5.0kb upstream 9859 true Scaffold3380: 9087-18945 Capsella grandiflora
Cagra.3380s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3380: 9087-14086 Capsella grandiflora
Cagra.3380s0005 5.0kb downstream 5.0kb downstream 9859 true Scaffold3380: 14087-23945 Capsella grandiflora
Cagra.3380s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3380: 18946-23945 Capsella grandiflora
Cagra.3380s0005 10.0kb upstream 10.0kb upstream 14859 true Scaffold3380: 4087-18945 Capsella grandiflora
Cagra.3380s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3380: 4087-14086 Capsella grandiflora
Cagra.3380s0005 10.0kb downstream 10.0kb downstream 14859 true Scaffold3380: 14087-28945 Capsella grandiflora
Cagra.3380s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3380: 18946-28945 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366314 5261 Brassicaceae View MSA
123832470 5264 Brassicales-Malvales View MSA
124340118 5266 SBM View MSA
124242550 5268 Malvidae View MSA
124063838 5270 Rosid View MSA
123738169 5271 Pentapetalae View MSA
122794417 5272 Eudicot View MSA
122046945 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121346991 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain