Gene : Cagra.3388s0002 C. grandiflora v1.1
Defline:  (1 of 25) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) (SLR1-BP) Genomic Order:  2
Name:  ? Cagra.3388s0002 Secondary Identifier:  ? PAC:28919478
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3388s0002 0.5kb upstream 0.5kb upstream 1060 true Scaffold3388: 4791-5850 Capsella grandiflora
Cagra.3388s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3388: 5351-5850 Capsella grandiflora
Cagra.3388s0002 0.5kb downstream 0.5kb downstream 1060 true Scaffold3388: 4291-5350 Capsella grandiflora
Cagra.3388s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3388: 4291-4790 Capsella grandiflora
Cagra.3388s0002 1.0kb upstream 1.0kb upstream 1560 true Scaffold3388: 4791-6350 Capsella grandiflora
Cagra.3388s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3388: 5351-6350 Capsella grandiflora
Cagra.3388s0002 1.0kb downstream 1.0kb downstream 1560 true Scaffold3388: 3791-5350 Capsella grandiflora
Cagra.3388s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3388: 3791-4790 Capsella grandiflora
Cagra.3388s0002 2.0kb upstream 2.0kb upstream 2560 true Scaffold3388: 4791-7350 Capsella grandiflora
Cagra.3388s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3388: 5351-7350 Capsella grandiflora
Cagra.3388s0002 2.0kb downstream 2.0kb downstream 2560 true Scaffold3388: 2791-5350 Capsella grandiflora
Cagra.3388s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3388: 2791-4790 Capsella grandiflora
Cagra.3388s0002 5.0kb upstream 5.0kb upstream 5560 true Scaffold3388: 4791-10350 Capsella grandiflora
Cagra.3388s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3388: 5351-10350 Capsella grandiflora
Cagra.3388s0002 5.0kb downstream 5.0kb downstream 5350 true Scaffold3388: 1-5350 Capsella grandiflora
Cagra.3388s0002 5.0kb downstream 5.0kb downstream 4790 false Scaffold3388: 1-4790 Capsella grandiflora
Cagra.3388s0002 10.0kb upstream 10.0kb upstream 10560 true Scaffold3388: 4791-15350 Capsella grandiflora
Cagra.3388s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3388: 5351-15350 Capsella grandiflora
Cagra.3388s0002 10.0kb downstream 10.0kb downstream 5350 true Scaffold3388: 1-5350 Capsella grandiflora
Cagra.3388s0002 10.0kb downstream 10.0kb downstream 4790 false Scaffold3388: 1-4790 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499836 5273 Angiosperm View MSA
122338743 5261 Brassicaceae View MSA
123779292 5264 Brassicales-Malvales View MSA
124277621 5266 SBM View MSA
124132808 5268 Malvidae View MSA
123861068 5270 Rosid View MSA
123446638 5271 Pentapetalae View MSA
122482184 5272 Eudicot View MSA
120773170 5274 Embryophyte View MSA
122815492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain