Gene : Cagra.3356s0048 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10071:SF159 - GATA TRANSCRIPTION FACTOR 26-RELATED Genomic Order:  48
Name:  ? Cagra.3356s0048 Secondary Identifier:  ? PAC:28898116
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0048 0.5kb upstream 0.5kb upstream 3944 true Scaffold3356: 183867-187810 Capsella grandiflora
Cagra.3356s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 187311-187810 Capsella grandiflora
Cagra.3356s0048 0.5kb downstream 0.5kb downstream 3944 true Scaffold3356: 183367-187310 Capsella grandiflora
Cagra.3356s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 183367-183866 Capsella grandiflora
Cagra.3356s0048 1.0kb upstream 1.0kb upstream 4444 true Scaffold3356: 183867-188310 Capsella grandiflora
Cagra.3356s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 187311-188310 Capsella grandiflora
Cagra.3356s0048 1.0kb downstream 1.0kb downstream 4444 true Scaffold3356: 182867-187310 Capsella grandiflora
Cagra.3356s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 182867-183866 Capsella grandiflora
Cagra.3356s0048 2.0kb upstream 2.0kb upstream 5444 true Scaffold3356: 183867-189310 Capsella grandiflora
Cagra.3356s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 187311-189310 Capsella grandiflora
Cagra.3356s0048 2.0kb downstream 2.0kb downstream 5444 true Scaffold3356: 181867-187310 Capsella grandiflora
Cagra.3356s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 181867-183866 Capsella grandiflora
Cagra.3356s0048 5.0kb upstream 5.0kb upstream 8444 true Scaffold3356: 183867-192310 Capsella grandiflora
Cagra.3356s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 187311-192310 Capsella grandiflora
Cagra.3356s0048 5.0kb downstream 5.0kb downstream 8444 true Scaffold3356: 178867-187310 Capsella grandiflora
Cagra.3356s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 178867-183866 Capsella grandiflora
Cagra.3356s0048 10.0kb upstream 10.0kb upstream 13444 true Scaffold3356: 183867-197310 Capsella grandiflora
Cagra.3356s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 187311-197310 Capsella grandiflora
Cagra.3356s0048 10.0kb downstream 10.0kb downstream 13444 true Scaffold3356: 173867-187310 Capsella grandiflora
Cagra.3356s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 173867-183866 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361001 5261 Brassicaceae View MSA
123839340 5264 Brassicales-Malvales View MSA
124342092 5266 SBM View MSA
124239595 5268 Malvidae View MSA
124050743 5270 Rosid View MSA
123750773 5271 Pentapetalae View MSA
122793174 5272 Eudicot View MSA
122046202 5273 Angiosperm View MSA
121348963 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain