Gene : Cagra.3356s0055 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12395 - DOM-3 RELATED Genomic Order:  55
Name:  ? Cagra.3356s0055 Secondary Identifier:  ? PAC:28898107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0055 0.5kb upstream 0.5kb upstream 3930 true Scaffold3356: 211720-215649 Capsella grandiflora
Cagra.3356s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 211720-212219 Capsella grandiflora
Cagra.3356s0055 0.5kb downstream 0.5kb downstream 3930 true Scaffold3356: 212220-216149 Capsella grandiflora
Cagra.3356s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 215650-216149 Capsella grandiflora
Cagra.3356s0055 1.0kb upstream 1.0kb upstream 4430 true Scaffold3356: 211220-215649 Capsella grandiflora
Cagra.3356s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 211220-212219 Capsella grandiflora
Cagra.3356s0055 1.0kb downstream 1.0kb downstream 4430 true Scaffold3356: 212220-216649 Capsella grandiflora
Cagra.3356s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 215650-216649 Capsella grandiflora
Cagra.3356s0055 2.0kb upstream 2.0kb upstream 5430 true Scaffold3356: 210220-215649 Capsella grandiflora
Cagra.3356s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 210220-212219 Capsella grandiflora
Cagra.3356s0055 2.0kb downstream 2.0kb downstream 5430 true Scaffold3356: 212220-217649 Capsella grandiflora
Cagra.3356s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 215650-217649 Capsella grandiflora
Cagra.3356s0055 5.0kb upstream 5.0kb upstream 8430 true Scaffold3356: 207220-215649 Capsella grandiflora
Cagra.3356s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 207220-212219 Capsella grandiflora
Cagra.3356s0055 5.0kb downstream 5.0kb downstream 8430 true Scaffold3356: 212220-220649 Capsella grandiflora
Cagra.3356s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 215650-220649 Capsella grandiflora
Cagra.3356s0055 10.0kb upstream 10.0kb upstream 13430 true Scaffold3356: 202220-215649 Capsella grandiflora
Cagra.3356s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 202220-212219 Capsella grandiflora
Cagra.3356s0055 10.0kb downstream 10.0kb downstream 13430 true Scaffold3356: 212220-225649 Capsella grandiflora
Cagra.3356s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 215650-225649 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378980 5261 Brassicaceae View MSA
123840224 5264 Brassicales-Malvales View MSA
124347008 5266 SBM View MSA
124245475 5268 Malvidae View MSA
124073071 5270 Rosid View MSA
123741994 5271 Pentapetalae View MSA
122794748 5272 Eudicot View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain