Gene : Cagra.3356s0056 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11740 - CASEIN KINASE II BETA CHAIN Genomic Order:  56
Name:  ? Cagra.3356s0056 Secondary Identifier:  ? PAC:28898180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3356s0056 0.5kb upstream 0.5kb upstream 2529 true Scaffold3356: 215456-217984 Capsella grandiflora
Cagra.3356s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold3356: 215456-215955 Capsella grandiflora
Cagra.3356s0056 0.5kb downstream 0.5kb downstream 2529 true Scaffold3356: 215956-218484 Capsella grandiflora
Cagra.3356s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold3356: 217985-218484 Capsella grandiflora
Cagra.3356s0056 1.0kb upstream 1.0kb upstream 3029 true Scaffold3356: 214956-217984 Capsella grandiflora
Cagra.3356s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold3356: 214956-215955 Capsella grandiflora
Cagra.3356s0056 1.0kb downstream 1.0kb downstream 3029 true Scaffold3356: 215956-218984 Capsella grandiflora
Cagra.3356s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold3356: 217985-218984 Capsella grandiflora
Cagra.3356s0056 2.0kb upstream 2.0kb upstream 4029 true Scaffold3356: 213956-217984 Capsella grandiflora
Cagra.3356s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold3356: 213956-215955 Capsella grandiflora
Cagra.3356s0056 2.0kb downstream 2.0kb downstream 4029 true Scaffold3356: 215956-219984 Capsella grandiflora
Cagra.3356s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold3356: 217985-219984 Capsella grandiflora
Cagra.3356s0056 5.0kb upstream 5.0kb upstream 7029 true Scaffold3356: 210956-217984 Capsella grandiflora
Cagra.3356s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold3356: 210956-215955 Capsella grandiflora
Cagra.3356s0056 5.0kb downstream 5.0kb downstream 7029 true Scaffold3356: 215956-222984 Capsella grandiflora
Cagra.3356s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold3356: 217985-222984 Capsella grandiflora
Cagra.3356s0056 10.0kb upstream 10.0kb upstream 12029 true Scaffold3356: 205956-217984 Capsella grandiflora
Cagra.3356s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold3356: 205956-215955 Capsella grandiflora
Cagra.3356s0056 10.0kb downstream 10.0kb downstream 12029 true Scaffold3356: 215956-227984 Capsella grandiflora
Cagra.3356s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold3356: 217985-227984 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375481 5261 Brassicaceae View MSA
123838487 5264 Brassicales-Malvales View MSA
124347621 5266 SBM View MSA
124253898 5268 Malvidae View MSA
124060492 5270 Rosid View MSA
123744671 5271 Pentapetalae View MSA
122790889 5272 Eudicot View MSA
122051186 5273 Angiosperm View MSA
121348702 5274 Embryophyte View MSA
123428239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain