Gene : Cagra.3359s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23091:SF229 - ACETYLTRANSFERASE NSI Genomic Order:  4
Name:  ? Cagra.3359s0004 Secondary Identifier:  ? PAC:28894128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3359s0004 0.5kb upstream 0.5kb upstream 2101 true Scaffold3359: 19992-22092 Capsella grandiflora
Cagra.3359s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 21593-22092 Capsella grandiflora
Cagra.3359s0004 0.5kb downstream 0.5kb downstream 2101 true Scaffold3359: 19492-21592 Capsella grandiflora
Cagra.3359s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 19492-19991 Capsella grandiflora
Cagra.3359s0004 1.0kb upstream 1.0kb upstream 2601 true Scaffold3359: 19992-22592 Capsella grandiflora
Cagra.3359s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 21593-22592 Capsella grandiflora
Cagra.3359s0004 1.0kb downstream 1.0kb downstream 2601 true Scaffold3359: 18992-21592 Capsella grandiflora
Cagra.3359s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 18992-19991 Capsella grandiflora
Cagra.3359s0004 2.0kb upstream 2.0kb upstream 3601 true Scaffold3359: 19992-23592 Capsella grandiflora
Cagra.3359s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 21593-23592 Capsella grandiflora
Cagra.3359s0004 2.0kb downstream 2.0kb downstream 3601 true Scaffold3359: 17992-21592 Capsella grandiflora
Cagra.3359s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 17992-19991 Capsella grandiflora
Cagra.3359s0004 5.0kb upstream 5.0kb upstream 6601 true Scaffold3359: 19992-26592 Capsella grandiflora
Cagra.3359s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 21593-26592 Capsella grandiflora
Cagra.3359s0004 5.0kb downstream 5.0kb downstream 6601 true Scaffold3359: 14992-21592 Capsella grandiflora
Cagra.3359s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 14992-19991 Capsella grandiflora
Cagra.3359s0004 10.0kb upstream 10.0kb upstream 11601 true Scaffold3359: 19992-31592 Capsella grandiflora
Cagra.3359s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 21593-31592 Capsella grandiflora
Cagra.3359s0004 10.0kb downstream 10.0kb downstream 11601 true Scaffold3359: 9992-21592 Capsella grandiflora
Cagra.3359s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 9992-19991 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375311 5261 Brassicaceae View MSA
123830874 5264 Brassicales-Malvales View MSA
124337030 5266 SBM View MSA
124244492 5268 Malvidae View MSA
124073792 5270 Rosid View MSA
123739375 5271 Pentapetalae View MSA
122789117 5272 Eudicot View MSA
122047128 5273 Angiosperm View MSA
123428893 5275 Viridiplantae View MSA
121347685 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain