Gene : Cagra.3359s0006 C. grandiflora v1.1
Defline:  (1 of 5) PTHR13018:SF47 - ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  6
Name:  ? Cagra.3359s0006 Secondary Identifier:  ? PAC:28894123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3359s0006 0.5kb upstream 0.5kb upstream 4674 true Scaffold3359: 24444-29117 Capsella grandiflora
Cagra.3359s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3359: 28618-29117 Capsella grandiflora
Cagra.3359s0006 0.5kb downstream 0.5kb downstream 4674 true Scaffold3359: 23944-28617 Capsella grandiflora
Cagra.3359s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3359: 23944-24443 Capsella grandiflora
Cagra.3359s0006 1.0kb upstream 1.0kb upstream 5174 true Scaffold3359: 24444-29617 Capsella grandiflora
Cagra.3359s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3359: 28618-29617 Capsella grandiflora
Cagra.3359s0006 1.0kb downstream 1.0kb downstream 5174 true Scaffold3359: 23444-28617 Capsella grandiflora
Cagra.3359s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3359: 23444-24443 Capsella grandiflora
Cagra.3359s0006 2.0kb upstream 2.0kb upstream 6174 true Scaffold3359: 24444-30617 Capsella grandiflora
Cagra.3359s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3359: 28618-30617 Capsella grandiflora
Cagra.3359s0006 2.0kb downstream 2.0kb downstream 6174 true Scaffold3359: 22444-28617 Capsella grandiflora
Cagra.3359s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3359: 22444-24443 Capsella grandiflora
Cagra.3359s0006 5.0kb upstream 5.0kb upstream 9174 true Scaffold3359: 24444-33617 Capsella grandiflora
Cagra.3359s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3359: 28618-33617 Capsella grandiflora
Cagra.3359s0006 5.0kb downstream 5.0kb downstream 9174 true Scaffold3359: 19444-28617 Capsella grandiflora
Cagra.3359s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3359: 19444-24443 Capsella grandiflora
Cagra.3359s0006 10.0kb upstream 10.0kb upstream 14174 true Scaffold3359: 24444-38617 Capsella grandiflora
Cagra.3359s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3359: 28618-38617 Capsella grandiflora
Cagra.3359s0006 10.0kb downstream 10.0kb downstream 14174 true Scaffold3359: 14444-28617 Capsella grandiflora
Cagra.3359s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3359: 14444-24443 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362604 5261 Brassicaceae View MSA
123831066 5264 Brassicales-Malvales View MSA
124339664 5266 SBM View MSA
124239408 5268 Malvidae View MSA
124064866 5270 Rosid View MSA
123745735 5271 Pentapetalae View MSA
122788976 5272 Eudicot View MSA
122046937 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain